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Aliases for RPL23AP26 Gene

Aliases for RPL23AP26 Gene

  • Ribosomal Protein L23a Pseudogene 26 2 3 5
  • RPL23A_14_334 3

External Ids for RPL23AP26 Gene

Previous GeneCards Identifiers for RPL23AP26 Gene

  • GC02P232159
  • GC02P232451

Summaries for RPL23AP26 Gene

GeneCards Summary for RPL23AP26 Gene

RPL23AP26 (Ribosomal Protein L23a Pseudogene 26) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP26 Gene

Genomics for RPL23AP26 Gene

Regulatory Elements for RPL23AP26 Gene

Enhancers for RPL23AP26 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F231785 1.2 ENCODE 45.5 +200.6 200606 1.9 HDGF PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 RPL28P2 RPL23AP26 ENSG00000233538 LOC100289360 ENSG00000241409 EEF1B2P7 HTR2B PDE6D
GH02F231705 1.2 ENCODE 45.5 +123.2 123219 7.7 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 RPL23AP26 RPL28P2 ENSG00000233538 LOC100289360 HTR2B COPS7B RNU2-22P GC02M231705 GC02P231712
GH02F231583 0.4 ENCODE 0.8 -1.5 -1496 1.2 ZSCAN29 NMUR1 NCL RNU2-22P LINC00471 GC02P231586 RPL23AP26 GC02P231560
GH02F231571 0.6 ENCODE 0.4 -14.0 -14004 1.3 CTCF JUND POLR2A TAL1 PRDM10 ZSCAN29 NMUR1 SNORA75 SNORD20 LINC00471 GC02P231560 GC02P231586 RPL23AP26
GH02F231563 0.6 ENCODE 0.3 -22.3 -22300 0.2 ZBTB10 CTCF ZNF654 WRNIP1 SMC3 TRIM22 RAD21 GC02P231560 GC02P231586 RPL23AP26
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL23AP26 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP26 Gene

Chromosome:
2
Start:
231,585,864 bp from pter
End:
231,590,927 bp from pter
Size:
5,064 bases
Orientation:
Plus strand

Genomic View for RPL23AP26 Gene

Genes around RPL23AP26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP26 Gene

Proteins for RPL23AP26 Gene

Post-translational modifications for RPL23AP26 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP26 Gene

Domains & Families for RPL23AP26 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP26 Gene

Function for RPL23AP26 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP26 Gene

Localization for RPL23AP26 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23AP26 Gene

Pathways & Interactions for RPL23AP26 Gene

SuperPathways for RPL23AP26 Gene

No Data Available

Interacting Proteins for RPL23AP26 Gene

Gene Ontology (GO) - Biological Process for RPL23AP26 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP26 Gene

Transcripts for RPL23AP26 Gene

mRNA/cDNA for RPL23AP26 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP26 Gene

No ASD Table

Relevant External Links for RPL23AP26 Gene

GeneLoc Exon Structure for
RPL23AP26
ECgene alternative splicing isoforms for
RPL23AP26

Expression for RPL23AP26 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23AP26 Gene

mRNA differential expression in normal tissues according to GTEx for RPL23AP26 Gene

This gene is overexpressed in Testis (x40.3).

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP26 Gene:

RPL23AP26
genes like me logo Genes that share expression patterns with RPL23AP26: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL23AP26 Gene

Orthologs for RPL23AP26 Gene

Evolution for RPL23AP26 Gene

ENSEMBL:
Gene Tree for RPL23AP26 (if available)
TreeFam:
Gene Tree for RPL23AP26 (if available)

No data available for Orthologs for RPL23AP26 Gene

Paralogs for RPL23AP26 Gene

No data available for Paralogs for RPL23AP26 Gene

Variants for RPL23AP26 Gene

Relevant External Links for RPL23AP26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP26 Gene

Disorders for RPL23AP26 Gene

No disorders were found for RPL23AP26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP26 Gene

Publications for RPL23AP26 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL23AP26 Gene

Sources for RPL23AP26 Gene

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