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Aliases for RPL23AP23 Gene

Subcategory (RNA class) for RPL23AP23 Gene

antisense

Aliases for RPL23AP23 Gene

  • Ribosomal Protein L23a Pseudogene 23 2 3 5
  • RPL23A_5_178 3

External Ids for RPL23AP23 Gene

ORGUL Members for RPL23AP23 Gene

Previous GeneCards Identifiers for RPL23AP23 Gene

  • GC01U902276
  • GC01P235460

Summaries for RPL23AP23 Gene

GeneCards Summary for RPL23AP23 Gene

RPL23AP23 (Ribosomal Protein L23a Pseudogene 23) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP23 Gene

Genomics for RPL23AP23 Gene

Regulatory Elements for RPL23AP23 Gene

Enhancers for RPL23AP23 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F235289 1.7 FANTOM5 Ensembl ENCODE 0.8 -0.1 -65 12.8 PKNOX1 ATF1 MLX ZFP64 ARID4B SIN3A ZNF121 GATA2 FOS ZNF202 ARID4B RPS21P1 GGPS1 LDHAP2 TOMM20 RBM34 RPL23AP23 GC01P235225
GH01F235304 1.4 FANTOM5 Ensembl ENCODE 0.4 +9.4 9436 3.4 CTCF PKNOX1 FEZF1 ZNF121 ZNF316 GATA3 PRDM10 NR2F6 ZNF600 TCF7L2 ARID4B GGPS1 RBM34 GC01M235309 RPL23AP23
GH01F235274 1 Ensembl ENCODE 0.3 -19.8 -19777 2.6 ZNF202 ZNF263 SCRT1 PKNOX1 ZBTB7A YY1 RELA HIC1 SCRT2 NFYB ARID4B RPS21P1 GGPS1 RPL23AP23 GC01P235225
GH01F235287 0.7 Ensembl 0.4 -7.9 -7865 0.4 NR2F1 GFI1B BACH1 MAFG ZNF664 ZNF316 POLR2A IKZF1 IRF1 NFE2 GGPS1 ARID4B RPL23AP23 GC01P235225
GH01F235278 0.9 Ensembl 0.3 -16.5 -16465 1.6 HDGF YBX3 NFRKB FOS EGR2 SMARCA5 ZBTB11 MEF2D MAFF SMARCA4 GGPS1 ARID4B RPL23AP23 GC01P235225
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL23AP23 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP23 Gene

Chromosome:
1
Start:
235,295,865 bp from pter
End:
235,296,337 bp from pter
Size:
473 bases
Orientation:
Plus strand

Genomic View for RPL23AP23 Gene

Genes around RPL23AP23 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP23 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP23 Gene

Proteins for RPL23AP23 Gene

Post-translational modifications for RPL23AP23 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP23 Gene

Domains & Families for RPL23AP23 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP23 Gene

Function for RPL23AP23 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP23 Gene

Localization for RPL23AP23 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23AP23 Gene

Pathways & Interactions for RPL23AP23 Gene

SuperPathways for RPL23AP23 Gene

No Data Available

Interacting Proteins for RPL23AP23 Gene

Gene Ontology (GO) - Biological Process for RPL23AP23 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP23 Gene

Transcripts for RPL23AP23 Gene

mRNA/cDNA for RPL23AP23 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP23 Gene

No ASD Table

Relevant External Links for RPL23AP23 Gene

GeneLoc Exon Structure for
RPL23AP23
ECgene alternative splicing isoforms for
RPL23AP23

Expression for RPL23AP23 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23AP23 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP23 Gene:

RPL23AP23
genes like me logo Genes that share expression patterns with RPL23AP23: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL23AP23 Gene

Orthologs for RPL23AP23 Gene

Evolution for RPL23AP23 Gene

ENSEMBL:
Gene Tree for RPL23AP23 (if available)
TreeFam:
Gene Tree for RPL23AP23 (if available)

No data available for Orthologs for RPL23AP23 Gene

Paralogs for RPL23AP23 Gene

No data available for Paralogs for RPL23AP23 Gene

Variants for RPL23AP23 Gene

Relevant External Links for RPL23AP23 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP23

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP23 Gene

Disorders for RPL23AP23 Gene

No disorders were found for RPL23AP23 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP23 Gene

Publications for RPL23AP23 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL23AP23 Gene

Sources for RPL23AP23 Gene

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