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Aliases for RPL23AP18 Gene

Aliases for RPL23AP18 Gene

  • Ribosomal Protein L23a Pseudogene 18 2 3 5
  • RPL23A_3_161 3

External Ids for RPL23AP18 Gene

Previous GeneCards Identifiers for RPL23AP18 Gene

  • GC01M210550
  • GC01M212483

Summaries for RPL23AP18 Gene

GeneCards Summary for RPL23AP18 Gene

RPL23AP18 (Ribosomal Protein L23a Pseudogene 18) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP18 Gene

Genomics for RPL23AP18 Gene

Regulatory Elements for RPL23AP18 Gene

Enhancers for RPL23AP18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G212309 1.2 Ensembl ENCODE dbSUPER 0.7 -1.1 -1119 1.4 SOX13 TFAP4 CEBPG RBBP5 ZNF155 ZFHX2 ZNF157 EGR2 EZH2 GATAD2A PPP2R5A TMEM206 DTL INTS7 RPL23AP18 ENSG00000234915
GH01G212311 1 dbSUPER 0.7 -3.8 -3782 2.8 ATF1 FOXA2 PKNOX1 SIN3A GLIS2 FOS DEK TSHZ1 TBX21 ZNF592 TMEM206 PPP2R5A ANGEL2 DTL INTS7 SNX25P1 RPL23AP18 ENSG00000234915
GH01G212306 0.9 dbSUPER 0.7 +2.0 1998 1.5 ZFP64 TCF12 ZNF138 EGR1 ZNF354C IKZF2 ZNF202 ZNF680 ZNF362 ZNF426 INTS7 TMEM206 DTL RPL21P28 RPL23AP18 ENSG00000230063
GH01G212315 1.3 Ensembl ENCODE dbSUPER 0.4 -6.6 -6594 0.7 NFRKB RAD21 YY1 SMARCA5 ZNF654 ZNF362 USF2 REST HDAC8 TBX21 INTS7 DTL ENSG00000212187 RPL23AP18 ENSG00000234915
GH01G212312 0.7 FANTOM5 0.7 -2.2 -2153 0.1 FOXA2 BHLHE40 ZNF398 ZNF354B FOSL1 MAFF GLIS2 JUND IKZF1 GLIS1 TMEM206 DTL INTS7 RPL23AP18 ENSG00000234915
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL23AP18 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP18 Gene

Chromosome:
1
Start:
212,309,051 bp from pter
End:
212,309,518 bp from pter
Size:
468 bases
Orientation:
Minus strand

Genomic View for RPL23AP18 Gene

Genes around RPL23AP18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP18 Gene

Proteins for RPL23AP18 Gene

Post-translational modifications for RPL23AP18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP18 Gene

Domains & Families for RPL23AP18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP18 Gene

Function for RPL23AP18 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP18 Gene

Localization for RPL23AP18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23AP18 Gene

Pathways & Interactions for RPL23AP18 Gene

SuperPathways for RPL23AP18 Gene

No Data Available

Interacting Proteins for RPL23AP18 Gene

Gene Ontology (GO) - Biological Process for RPL23AP18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP18 Gene

Drugs & Compounds for RPL23AP18 Gene

No Compound Related Data Available

Transcripts for RPL23AP18 Gene

mRNA/cDNA for RPL23AP18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP18 Gene

No ASD Table

Relevant External Links for RPL23AP18 Gene

GeneLoc Exon Structure for
RPL23AP18
ECgene alternative splicing isoforms for
RPL23AP18

Expression for RPL23AP18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP18 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP18 Gene:

RPL23AP18
genes like me logo Genes that share expression patterns with RPL23AP18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP18 Gene

Orthologs for RPL23AP18 Gene

Evolution for RPL23AP18 Gene

ENSEMBL:
Gene Tree for RPL23AP18 (if available)
TreeFam:
Gene Tree for RPL23AP18 (if available)

No data available for Orthologs for RPL23AP18 Gene

Paralogs for RPL23AP18 Gene

No data available for Paralogs for RPL23AP18 Gene

Variants for RPL23AP18 Gene

Relevant External Links for RPL23AP18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP18 Gene

Disorders for RPL23AP18 Gene

No disorders were found for RPL23AP18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP18 Gene

Publications for RPL23AP18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL23AP18 Gene

Sources for RPL23AP18 Gene

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