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Aliases for RPL23AP15 Gene

Aliases for RPL23AP15 Gene

  • Ribosomal Protein L23a Pseudogene 15 2 3 5
  • RPL23A_4_173 3

External Ids for RPL23AP15 Gene

Previous GeneCards Identifiers for RPL23AP15 Gene

  • GC01M226705
  • GC01M228637
  • GC01M228641

Summaries for RPL23AP15 Gene

GeneCards Summary for RPL23AP15 Gene

RPL23AP15 (Ribosomal Protein L23a Pseudogene 15) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP15 Gene

Genomics for RPL23AP15 Gene

Regulatory Elements for RPL23AP15 Gene

Enhancers for RPL23AP15 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G228500 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.9 -51.3 -51280 1.8 PKNOX1 WRNIP1 ARID4B SIN3A DMAP1 ZNF48 ZNF766 ELK1 ZNF143 REST HIST3H3 HIST3H2A HIST3H2BB RPL23AP15 CICP26 OBSCN-AS1 OBSCN C1orf35 RNF187 LOC105373124
GH01G228377 1.5 Ensembl ENCODE dbSUPER 11.2 +70.9 70920 1.8 AGO1 SIN3A ZNF2 ZNF121 GLIS2 KLF7 SP3 TSHZ1 REST ZNF623 TRIM11 ENSG00000231563 RPL23AP15 HIST3H2A HIST3H2BB OBSCN-AS1 OBSCN ENSG00000270104 LOC101927401
GH01G228130 1.3 Ensembl ENCODE 10.9 +318.0 318010 2.0 HDGF PKNOX1 ARNT ARID4B SIN3A YBX1 ZNF2 ZNF143 FOS ZNF548 CICP26 C1orf35 ENSG00000269890 OBSCN OBSCN-AS1 HIST3H3 RPL23AP15 HIST3H2A HIST3H2BB ENSG00000231563
GH01G228212 1.3 ENCODE dbSUPER 10.8 +234.6 234639 4.8 AGO1 ARID4B SIN3A YBX1 ZNF2 CBX5 ZNF143 KLF13 ZNF263 SP3 OBSCN RPL23AP15 HIST3H2A HIST3H2BB OBSCN-AS1 PIR37830
GH01G228137 1.4 ENCODE dbSUPER 10 +307.6 307557 8.8 HDGF PKNOX1 CREB3L1 ARNT ARID4B SIN3A DMAP1 YY1 ZNF143 ZNF207 OBSCN CICP26 ENSG00000269890 OBSCN-AS1 FAM96AP2 MRPL55 C1orf35 ENSG00000231563 RPL23AP15 HIST3H2A
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL23AP15 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP15 Gene

Chromosome:
1
Start:
228,449,163 bp from pter
End:
228,449,621 bp from pter
Size:
459 bases
Orientation:
Minus strand

Genomic View for RPL23AP15 Gene

Genes around RPL23AP15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP15 Gene

Proteins for RPL23AP15 Gene

Post-translational modifications for RPL23AP15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP15 Gene

Domains & Families for RPL23AP15 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP15 Gene

Function for RPL23AP15 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP15 Gene

Localization for RPL23AP15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23AP15 Gene

Pathways & Interactions for RPL23AP15 Gene

SuperPathways for RPL23AP15 Gene

No Data Available

Interacting Proteins for RPL23AP15 Gene

Gene Ontology (GO) - Biological Process for RPL23AP15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP15 Gene

Drugs & Compounds for RPL23AP15 Gene

No Compound Related Data Available

Transcripts for RPL23AP15 Gene

mRNA/cDNA for RPL23AP15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP15 Gene

No ASD Table

Relevant External Links for RPL23AP15 Gene

GeneLoc Exon Structure for
RPL23AP15
ECgene alternative splicing isoforms for
RPL23AP15

Expression for RPL23AP15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP15 Gene

mRNA differential expression in normal tissues according to GTEx for RPL23AP15 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x12.9) and Brain - Cerebellum (x11.9).

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP15 Gene:

RPL23AP15
genes like me logo Genes that share expression patterns with RPL23AP15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP15 Gene

Orthologs for RPL23AP15 Gene

Evolution for RPL23AP15 Gene

ENSEMBL:
Gene Tree for RPL23AP15 (if available)
TreeFam:
Gene Tree for RPL23AP15 (if available)

No data available for Orthologs for RPL23AP15 Gene

Paralogs for RPL23AP15 Gene

No data available for Paralogs for RPL23AP15 Gene

Variants for RPL23AP15 Gene

Relevant External Links for RPL23AP15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP15 Gene

Disorders for RPL23AP15 Gene

No disorders were found for RPL23AP15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP15 Gene

Publications for RPL23AP15 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL23AP15 Gene

Sources for RPL23AP15 Gene

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