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Aliases for RPL23AP15 Gene

Aliases for RPL23AP15 Gene

  • Ribosomal Protein L23a Pseudogene 15 2 3 5
  • RPL23A_4_173 3

External Ids for RPL23AP15 Gene

Previous GeneCards Identifiers for RPL23AP15 Gene

  • GC01M226705
  • GC01M228637
  • GC01M228641

Summaries for RPL23AP15 Gene

GeneCards Summary for RPL23AP15 Gene

RPL23AP15 (Ribosomal Protein L23a Pseudogene 15) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP15 Gene

Genomics for RPL23AP15 Gene

Regulatory Elements for RPL23AP15 Gene

Enhancers for RPL23AP15 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F228500 1.5 FANTOM5 Ensembl ENCODE 11.9 -51.3 -51280 1.8 WRNIP1 ARID4B SIN3A DMAP1 ZNF48 ZNF143 REST TBX21 KAT8 CREB3 HIST3H2A HIST3H2BB RPL23AP15 C1orf35 C1orf145 OBSCN RNF187 LOC105373124 ENSG00000279306
GH01F228130 1.3 Ensembl ENCODE 10.9 +318.0 318010 2.0 ATF1 PKNOX1 ARID4B GLI4 YBX1 ZNF2 ZNF121 GLIS2 ZNF143 KLF7 CICP26 ENSG00000269890 C1orf35 HIST3H3 OBSCN C1orf145 RPL23AP15 HIST3H2A HIST3H2BB ENSG00000231563
GH01F228137 1.4 Ensembl ENCODE 10 +307.6 307557 8.8 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF143 ZNF548 OBSCN CICP26 ENSG00000269890 C1orf145 C1orf35 FAM96AP2 MRPL55 DUSP5P1 ENSG00000231563 RPL23AP15
GH01F228377 1.2 Ensembl ENCODE 11.2 +70.9 70920 1.8 SIN3A ZNF2 ZNF121 GLIS2 KLF7 SP3 TSHZ1 REST ZNF518A ZNF623 PRSS38 LOC100421842 ENSG00000233920 ENSG00000231563 MIR6742 TRIM11 RPL23AP15 HIST3H2A HIST3H2BB C1orf145
GH01F228268 1.2 Ensembl 10.4 +180.1 180141 2.8 PKNOX1 ARNT CREB3L1 SIN3A FEZF1 ZNF2 ZNF766 ZNF302 CBX5 ZNF207 OBSCN CICP26 PRSS38 ENSG00000269890 HIST3H3 LOC100421842 ENSG00000233920 DUSP5P1 ENSG00000269934 C1orf145
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL23AP15 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP15 Gene

Chromosome:
1
Start:
228,449,163 bp from pter
End:
228,449,621 bp from pter
Size:
459 bases
Orientation:
Minus strand

Genomic View for RPL23AP15 Gene

Genes around RPL23AP15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP15 Gene

Proteins for RPL23AP15 Gene

Post-translational modifications for RPL23AP15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP15 Gene

Domains & Families for RPL23AP15 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP15 Gene

Function for RPL23AP15 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP15 Gene

Localization for RPL23AP15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23AP15 Gene

Pathways & Interactions for RPL23AP15 Gene

SuperPathways for RPL23AP15 Gene

No Data Available

Interacting Proteins for RPL23AP15 Gene

Gene Ontology (GO) - Biological Process for RPL23AP15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP15 Gene

Transcripts for RPL23AP15 Gene

mRNA/cDNA for RPL23AP15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP15 Gene

No ASD Table

Relevant External Links for RPL23AP15 Gene

GeneLoc Exon Structure for
RPL23AP15
ECgene alternative splicing isoforms for
RPL23AP15

Expression for RPL23AP15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23AP15 Gene

mRNA differential expression in normal tissues according to GTEx for RPL23AP15 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x12.9) and Brain - Cerebellum (x11.9).

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP15 Gene:

RPL23AP15
genes like me logo Genes that share expression patterns with RPL23AP15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL23AP15 Gene

Orthologs for RPL23AP15 Gene

Evolution for RPL23AP15 Gene

ENSEMBL:
Gene Tree for RPL23AP15 (if available)
TreeFam:
Gene Tree for RPL23AP15 (if available)

No data available for Orthologs for RPL23AP15 Gene

Paralogs for RPL23AP15 Gene

No data available for Paralogs for RPL23AP15 Gene

Variants for RPL23AP15 Gene

Relevant External Links for RPL23AP15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP15 Gene

Disorders for RPL23AP15 Gene

No disorders were found for RPL23AP15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP15 Gene

Publications for RPL23AP15 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL23AP15 Gene

Sources for RPL23AP15 Gene

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