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Aliases for RPL23AP11 Gene

Aliases for RPL23AP11 Gene

  • Ribosomal Protein L23a Pseudogene 11 2 3 5
  • RPL23A_29_1408 3

External Ids for RPL23AP11 Gene

Previous GeneCards Identifiers for RPL23AP11 Gene

  • GC14U900048
  • GC14M101118
  • GC14M102198
  • GC14M103129

Summaries for RPL23AP11 Gene

GeneCards Summary for RPL23AP11 Gene

RPL23AP11 (Ribosomal Protein L23a Pseudogene 11) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP11 Gene

Genomics for RPL23AP11 Gene

Regulatory Elements for RPL23AP11 Gene

Enhancers for RPL23AP11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F102616 0.6 Ensembl 16.4 +45.9 45928 0.4 CEBPB ZNF645 YBX1 ZNF670 ZFP41 ZNF121 ZNF157 ZNF580 FOS ZNF548 RPL23AP11 ENSG00000271780 ENSG00000272444 LOC105370681 RCOR1 GC14P102743
GH14F102522 1.4 FANTOM5 Ensembl ENCODE 16.2 +136.6 136635 6.2 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 RCOR1 TECPR2 RPL23AP11 MOK ANKRD9 TRAF3 DIO3 ENSG00000271780 RNU6-244P DIO3OS
GH14F103103 1 Ensembl ENCODE 16.2 -442.3 -442270 3.3 HDGF PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A YBX1 DMAP1 ZNF2 YY1 XRCC3 ENSG00000259444 RPL23AP11 ENSG00000260285 ENSG00000259775 CDC42BPB ENSG00000269940 GC14M103075 TNFAIP2
GH14F103517 0.7 ENCODE 16.2 -857.9 -857941 6.4 HDGF ARID4B SIN3A FEZF1 ZNF2 SLC30A9 CBX5 ZNF416 ZNF143 FOS MARK3 CKB XRCC3 CDC42BPB RPL23AP11 RNU7-160P ENSG00000260285 BAG5 ENSG00000269940 APOPT1
GH14F103054 0.2 ENCODE 16.2 -394.0 -394044 3.9 HDGF ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZNF302 ZNF143 ZNF416 ZNF548 XRCC3 RPL23AP11 CDC42BPB BAG5 RCOR1 RPL13P6
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL23AP11 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL23AP11 Gene

Chromosome:
14
Start:
102,662,193 bp from pter
End:
102,662,728 bp from pter
Size:
536 bases
Orientation:
Minus strand

Genomic View for RPL23AP11 Gene

Genes around RPL23AP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP11 Gene

Proteins for RPL23AP11 Gene

Post-translational modifications for RPL23AP11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP11 Gene

Domains & Families for RPL23AP11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP11 Gene

Function for RPL23AP11 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP11 Gene

Localization for RPL23AP11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL23AP11 Gene

Pathways & Interactions for RPL23AP11 Gene

SuperPathways for RPL23AP11 Gene

No Data Available

Interacting Proteins for RPL23AP11 Gene

Gene Ontology (GO) - Biological Process for RPL23AP11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP11 Gene

Transcripts for RPL23AP11 Gene

mRNA/cDNA for RPL23AP11 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP11 Gene

No ASD Table

Relevant External Links for RPL23AP11 Gene

GeneLoc Exon Structure for
RPL23AP11
ECgene alternative splicing isoforms for
RPL23AP11

Expression for RPL23AP11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23AP11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP11 Gene:

RPL23AP11
genes like me logo Genes that share expression patterns with RPL23AP11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL23AP11 Gene

Orthologs for RPL23AP11 Gene

Evolution for RPL23AP11 Gene

ENSEMBL:
Gene Tree for RPL23AP11 (if available)
TreeFam:
Gene Tree for RPL23AP11 (if available)

No data available for Orthologs for RPL23AP11 Gene

Paralogs for RPL23AP11 Gene

No data available for Paralogs for RPL23AP11 Gene

Variants for RPL23AP11 Gene

Relevant External Links for RPL23AP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP11 Gene

Disorders for RPL23AP11 Gene

No disorders were found for RPL23AP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP11 Gene

Publications for RPL23AP11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL23AP11 Gene

Sources for RPL23AP11 Gene

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