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Aliases for RPL22P3 Gene

Aliases for RPL22P3 Gene

  • Ribosomal Protein L22 Pseudogene 3 2 3
  • RP11-430L17.1 5
  • RPL22_1_15 3

External Ids for RPL22P3 Gene

Previous GeneCards Identifiers for RPL22P3 Gene

  • GC01M016572
  • GC01M016696

Summaries for RPL22P3 Gene

GeneCards Summary for RPL22P3 Gene

RPL22P3 (Ribosomal Protein L22 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL22P3 Gene

Genomics for RPL22P3 Gene

Regulatory Elements for RPL22P3 Gene

Enhancers for RPL22P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G016171 2 FANTOM5 Ensembl ENCODE dbSUPER 31.5 +191.1 191134 13.9 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 SP3 MEF2D SSRP1 ZNF610 SPEN RPL22P3 EIF1AXP1 LINC01772 ARHGEF19 EPHA2 FAM131C ENSG00000237938 RPS16P1 MFAP2
GH01G016166 1 dbSUPER 39.7 +203.0 203015 0.6 PKNOX1 ARNT ZNF493 ZFP64 GLIS2 ZNF302 KLF7 ZNF202 SP3 TSHZ1 SPEN RPL22P3 ENSG00000237938 LINC01772 FBXO42 ARHGEF19 ARHGEF19-AS1 EIF1AXP1 FAM131C SPATA21
GH01G015882 2.1 FANTOM5 Ensembl ENCODE dbSUPER 18.9 +484.2 484239 5.4 HDGF PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SPEN EIF1AXP1 RPL22P3 HSPB7 FLJ37453 ENSG00000237938 LINC01772 SPATA21 FBXO42 CLCNKA
GH01G015573 0.9 dbSUPER 39.6 +795.0 794964 2.4 ZFP64 ZNF2 RAD21 YY1 ZNF121 ZNF354C KLF7 ZNF654 ZNF680 ZNF362 SPEN RPL22P3 ENSG00000237938 FBXO42 LINC01772 SPATA21 RPS16P1 AGMAT PIR62159
GH01G017227 0.9 dbSUPER 39.6 -858.3 -858296 0.9 ZNF493 ZFP64 KLF17 ZBTB7B ZNF354C SCRT2 FOS RCOR1 SP3 ZNF680 RPL22P3 LINC01772 FBXO42 EIF1AXP1 SPATA21 MFAP2 LOC105376805 PADI3 PADI1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL22P3 on UCSC Golden Path with GeneCards custom track

Promoters for RPL22P3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000002056 1751 2001 CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 TBX21 ZNF610

Genomic Location for RPL22P3 Gene

Chromosome:
1
Start:
16,369,093 bp from pter
End:
16,369,551 bp from pter
Size:
459 bases
Orientation:
Minus strand

Genomic View for RPL22P3 Gene

Genes around RPL22P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL22P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL22P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL22P3 Gene

Proteins for RPL22P3 Gene

Post-translational modifications for RPL22P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL22P3 Gene

Domains & Families for RPL22P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL22P3 Gene

Function for RPL22P3 Gene

Phenotypes for RPL22P3 Gene

GenomeRNAi human phenotypes for RPL22P3:
genes like me logo Genes that share phenotypes with RPL22P3: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL22P3 Gene

Localization for RPL22P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL22P3 Gene

Pathways & Interactions for RPL22P3 Gene

SuperPathways for RPL22P3 Gene

No Data Available

Interacting Proteins for RPL22P3 Gene

Gene Ontology (GO) - Biological Process for RPL22P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL22P3 Gene

Drugs & Compounds for RPL22P3 Gene

No Compound Related Data Available

Transcripts for RPL22P3 Gene

mRNA/cDNA for RPL22P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL22P3 Gene

No ASD Table

Relevant External Links for RPL22P3 Gene

GeneLoc Exon Structure for
RPL22P3
ECgene alternative splicing isoforms for
RPL22P3

Expression for RPL22P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL22P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL22P3 Gene:

RPL22P3
genes like me logo Genes that share expression patterns with RPL22P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL22P3 Gene

Orthologs for RPL22P3 Gene

Evolution for RPL22P3 Gene

ENSEMBL:
Gene Tree for RPL22P3 (if available)
TreeFam:
Gene Tree for RPL22P3 (if available)

No data available for Orthologs for RPL22P3 Gene

Paralogs for RPL22P3 Gene

No data available for Paralogs for RPL22P3 Gene

Variants for RPL22P3 Gene

Relevant External Links for RPL22P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL22P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL22P3 Gene

Disorders for RPL22P3 Gene

No disorders were found for RPL22P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL22P3 Gene

Publications for RPL22P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for RPL22P3 Gene

Sources for RPL22P3 Gene

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