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RPL22P22 Gene(Pseudogene)

Ribosomal Protein L22 Pseudogene 22

GCID:
GC0XM082506
GIFtS:
10
Genes Participants
UDN Logo

Aliases for RPL22P22 Gene

Subcategory (RNA class) for RPL22P22 Gene

lncRNA

Aliases for RPL22P22 Gene

  • Ribosomal Protein L22 Pseudogene 22 2 3 5
  • RPL22_10_1790 3

External Ids for RPL22P22 Gene

ORGUL Members for RPL22P22 Gene

Previous GeneCards Identifiers for RPL22P22 Gene

  • GC0XM081650
  • GC0XM081762

Summaries for RPL22P22 Gene

GeneCards Summary for RPL22P22 Gene

RPL22P22 (Ribosomal Protein L22 Pseudogene 22) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL22P22 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL22P22 Gene

Genomics for RPL22P22 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPL22P22 Gene

Promoters and enhancers for RPL22P22 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH0XI082533 Enhancer 0.8 VISTA UCNEbase 0.3 -27.5 -27467 1.7 GC0XP082562 RPL22P22
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL22P22 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL22P22 Gene

Genomic Locations for RPL22P22 Gene
chrX:82,506,434-82,506,812
(GRCh38/hg38)
Size:
379 bases
Orientation:
Minus strand
chrX:81,761,883-81,762,261
(GRCh37/hg19)

Genomic View for RPL22P22 Gene

Genes around RPL22P22 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL22P22 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL22P22 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL22P22 Gene

Proteins for RPL22P22 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL22P22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL22P22 Gene

Domains & Families for RPL22P22 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL22P22 Gene

Function for RPL22P22 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RPL22P22 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL22P22 Gene

Localization for RPL22P22 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL22P22 Gene

Pathways & Interactions for RPL22P22 Gene

SuperPathways for RPL22P22 Gene

PathCards logo More details on SuperPathways for RPL22P22
No Data Available

Interacting Proteins for RPL22P22 Gene

Gene Ontology (GO) - Biological Process for RPL22P22 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL22P22 Gene

Drugs & Compounds for RPL22P22 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL22P22 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPL22P22 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL22P22 Gene

No ASD Table

Relevant External Links for RPL22P22 Gene

GeneLoc Exon Structure for
RPL22P22
ECgene alternative splicing isoforms for
RPL22P22

Expression for RPL22P22 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL22P22 Gene

mRNA expression in normal human tissues for RPL22P22 Gene
mRNA expression by GTEx for RPL22P22 GenemRNA expression by BioGPS for RPL22P22 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL22P22 Gene:

RPL22P22
genes like me logo Genes that share expression patterns with RPL22P22: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL22P22 Gene

Orthologs for RPL22P22 Gene

Evolution for RPL22P22 Gene

ENSEMBL:
Gene Tree for RPL22P22 (if available)
TreeFam:
Gene Tree for RPL22P22 (if available)

No data available for Orthologs for RPL22P22 Gene

Paralogs for RPL22P22 Gene

No data available for Paralogs for RPL22P22 Gene

Variants for RPL22P22 Gene

Additional Variant Information for RPL22P22 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL22P22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL22P22 Gene

Disorders for RPL22P22 Gene

Additional Disease Information for RPL22P22

Genetic Association Database
(GAD)

No disorders were found for RPL22P22 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL22P22 Gene

Publications for RPL22P22 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. A genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder. (PMID: 20889312) Wang KS … Aragam N (Schizophrenia research 2010) 44 58
  3. Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study. (PMID: 17903297) Seshadri S … Wolf PA (BMC medical genetics 2007) 44 58
  4. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 44 58
  5. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 44 58

Products for RPL22P22 Gene

Sources for RPL22P22 Gene

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