Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL22P16 Gene

Subcategory (RNA class) for RPL22P16 Gene

lncRNA

Aliases for RPL22P16 Gene

  • Ribosomal Protein L22 Pseudogene 16 2 3
  • RPL22_6_780 3
  • AC092610.1 5

External Ids for RPL22P16 Gene

ORGUL Members for RPL22P16 Gene

Previous GeneCards Identifiers for RPL22P16 Gene

  • GC07U902610
  • GC07M004907
  • GC07M004908
  • GC07M004909

Summaries for RPL22P16 Gene

GeneCards Summary for RPL22P16 Gene

RPL22P16 (Ribosomal Protein L22 Pseudogene 16) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL22P16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL22P16 Gene

Genomics for RPL22P16 Gene

GeneHancer (GH) Regulatory Elements for RPL22P16 Gene

Promoters and enhancers for RPL22P16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I004881 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.4 -17.0 -16995 2.2 ATF1 ARNT SIN3A GLIS2 E2F8 ZNF143 ATF7 SP3 SP5 NFYC RADIL RPL22P16
GH07I004871 Enhancer 0.5 ENCODE 0.4 -6.9 -6863 1.4 MEIS2 PKNOX1 POLR2A CBFA2T3 RCOR1 MNT CHD2 RADIL RPL22P16
GH07I004873 Enhancer 0.2 FANTOM5 0.4 -8.2 -8183 0.1 RADIL RPL22P16
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL22P16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL22P16 Gene

Genomic Locations for RPL22P16 Gene
chr7:4,865,430-4,865,804
(GRCh38/hg38)
Size:
375 bases
Orientation:
Minus strand
chr7:4,905,061-4,905,435
(GRCh37/hg19)

Genomic View for RPL22P16 Gene

Genes around RPL22P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL22P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL22P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL22P16 Gene

Proteins for RPL22P16 Gene

Post-translational modifications for RPL22P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL22P16 Gene

Domains & Families for RPL22P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL22P16 Gene

Function for RPL22P16 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL22P16 Gene

Localization for RPL22P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL22P16 Gene

Pathways & Interactions for RPL22P16 Gene

SuperPathways for RPL22P16 Gene

No Data Available

Interacting Proteins for RPL22P16 Gene

Gene Ontology (GO) - Biological Process for RPL22P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL22P16 Gene

Drugs & Compounds for RPL22P16 Gene

No Compound Related Data Available

Transcripts for RPL22P16 Gene

mRNA/cDNA for RPL22P16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL22P16 Gene

No ASD Table

Relevant External Links for RPL22P16 Gene

GeneLoc Exon Structure for
RPL22P16
ECgene alternative splicing isoforms for
RPL22P16

Expression for RPL22P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL22P16 Gene

mRNA differential expression in normal tissues according to GTEx for RPL22P16 Gene

This gene is overexpressed in Testis (x47.6) and Brain - Cerebellum (x5.4).

NURSA nuclear receptor signaling pathways regulating expression of RPL22P16 Gene:

RPL22P16
genes like me logo Genes that share expression patterns with RPL22P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL22P16 Gene

Orthologs for RPL22P16 Gene

Evolution for RPL22P16 Gene

ENSEMBL:
Gene Tree for RPL22P16 (if available)
TreeFam:
Gene Tree for RPL22P16 (if available)

No data available for Orthologs for RPL22P16 Gene

Paralogs for RPL22P16 Gene

No data available for Paralogs for RPL22P16 Gene

Variants for RPL22P16 Gene

Additional Variant Information for RPL22P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL22P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL22P16 Gene

Disorders for RPL22P16 Gene

No disorders were found for RPL22P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL22P16 Gene

Publications for RPL22P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL22P16 Gene

Sources for RPL22P16 Gene

Content
Loading form....