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Aliases for RPL21P97 Gene

Aliases for RPL21P97 Gene

  • Ribosomal Protein L21 Pseudogene 97 2 3
  • RPL21_40_1120 3
  • RP11-16F15.2 5

External Ids for RPL21P97 Gene

Previous GeneCards Identifiers for RPL21P97 Gene

  • GC13P026726
  • GC13P027826
  • GC11P009682

Summaries for RPL21P97 Gene

GeneCards Summary for RPL21P97 Gene

RPL21P97 (Ribosomal Protein L21 Pseudogene 97) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P97 Gene

Genomics for RPL21P97 Gene

Regulatory Elements for RPL21P97 Gene

Enhancers for RPL21P97 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G009458 1.4 ENCODE dbSUPER 18.7 -199.0 -198997 5.0 CREB3L1 ZFP64 DMAP1 YY1 ZNF143 SP3 NFYC TBX21 MEF2D GLIS1 SNORA3B ZNF143 RPL27A RPL21P97 TMEM9B-AS1 WEE1 IPO7 LOC644656 PIR40365
GH11G009611 2.1 FANTOM5 Ensembl ENCODE dbSUPER 12.3 -44.3 -44322 8.5 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 TBX21 SWAP70 WEE1 RPL21P97 ENSG00000238387 ZNF143 DENND5A GC11M009621 GC11M009608
GH11G009751 2 FANTOM5 Ensembl ENCODE dbSUPER 11.7 +99.4 99374 15.9 MLX CREB3L1 ZFP64 FEZF1 DMAP1 SLC30A9 ZNF143 ZNF263 SP3 GLIS1 SBF2 SWAP70 TMEM9B-AS1 ENSG00000254397 RPL21P97 SBF2-AS1 ENSG00000238387 WEE1 CTR9 NRIP3
GH11G009361 1.9 FANTOM5 Ensembl ENCODE 11.4 -296.9 -296880 4.9 CREB3L1 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC SSRP1 DENND5A NRIP3 SNORA3B ZNF143 RPL21P97 RPL27A IPO7 TMEM41B TMEM9B SWAP70
GH11G010366 1.9 FANTOM5 Ensembl ENCODE dbSUPER 11.4 +706.5 706516 1.7 HDGF ATF1 ARNT ARID4B SIN3A DMAP1 ZNF48 YY1 ETS1 GATA2 ZBED5 ADM CTR9 RPL21P97 AMPD3 LOC105376544 GC11M010399 RNU6ATAC33P PIR60970
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P97 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P97 Gene

Chromosome:
11
Start:
9,660,395 bp from pter
End:
9,660,956 bp from pter
Size:
562 bases
Orientation:
Plus strand

Genomic View for RPL21P97 Gene

Genes around RPL21P97 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P97 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P97 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P97 Gene

Proteins for RPL21P97 Gene

Post-translational modifications for RPL21P97 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P97 Gene

Domains & Families for RPL21P97 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P97 Gene

Function for RPL21P97 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P97 Gene

Localization for RPL21P97 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P97 Gene

Pathways & Interactions for RPL21P97 Gene

SuperPathways for RPL21P97 Gene

No Data Available

Interacting Proteins for RPL21P97 Gene

Gene Ontology (GO) - Biological Process for RPL21P97 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P97 Gene

Drugs & Compounds for RPL21P97 Gene

No Compound Related Data Available

Transcripts for RPL21P97 Gene

mRNA/cDNA for RPL21P97 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P97 Gene

No ASD Table

Relevant External Links for RPL21P97 Gene

GeneLoc Exon Structure for
RPL21P97
ECgene alternative splicing isoforms for
RPL21P97

Expression for RPL21P97 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P97 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P97 Gene:

RPL21P97
genes like me logo Genes that share expression patterns with RPL21P97: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P97 Gene

Orthologs for RPL21P97 Gene

Evolution for RPL21P97 Gene

ENSEMBL:
Gene Tree for RPL21P97 (if available)
TreeFam:
Gene Tree for RPL21P97 (if available)

No data available for Orthologs for RPL21P97 Gene

Paralogs for RPL21P97 Gene

No data available for Paralogs for RPL21P97 Gene

Variants for RPL21P97 Gene

Relevant External Links for RPL21P97 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P97

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P97 Gene

Disorders for RPL21P97 Gene

No disorders were found for RPL21P97 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P97 Gene

Publications for RPL21P97 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Large-scale mapping of human protein-protein interactions by mass spectrometry. (PMID: 17353931) Ewing R.M. … Figeys D. (Mol. Syst. Biol. 2007) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for RPL21P97 Gene

Sources for RPL21P97 Gene

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