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Aliases for RPL21P97 Gene

Aliases for RPL21P97 Gene

  • Ribosomal Protein L21 Pseudogene 97 2 3
  • RPL21_40_1120 3
  • RP11-16F15.2 5

External Ids for RPL21P97 Gene

Previous GeneCards Identifiers for RPL21P97 Gene

  • GC13P026726
  • GC13P027826
  • GC11P009682

Summaries for RPL21P97 Gene

GeneCards Summary for RPL21P97 Gene

RPL21P97 (Ribosomal Protein L21 Pseudogene 97) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P97 Gene

Genomics for RPL21P97 Gene

Regulatory Elements for RPL21P97 Gene

Enhancers for RPL21P97 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F009361 1.5 FANTOM5 Ensembl ENCODE 22.3 -296.9 -296880 4.9 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC SSRP1 ZNF143 DENND5A SNORA3B NRIP3 WEE1 RPL21P97 TMEM9B-AS1 RPL27A AKIP1 ENSG00000254397
GH11F009458 0.2 ENCODE 18.7 -199.0 -198997 5.0 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A DMAP1 YY1 ZNF143 SNORA3B TMEM9B-AS1 WEE1 RPL27A RPL21P97 ENSG00000254397 IPO7 LOC644656 PIR40365
GH11F009638 0.6 Ensembl ENCODE 13.6 -20.8 -20795 2.8 ELF3 SMARCE1 ESRRA PKNOX1 MAX CEBPB ZNF384 ATF2 NR2F2 ZNF316 SWAP70 RPL21P97 ENSG00000238387 WEE1 RPL23AP65 ENSG00000255463 GC11P009661
GH11F009736 0.8 ENCODE 12.8 +76.1 76134 0.2 HDAC1 HDGF ARID4B SIN3A DMAP1 ZBTB40 THRB RARA GLIS2 ZNF143 SWAP70 RPL21P97 GC11P009745 RN7SKP50
GH11F009681 1.3 FANTOM5 Ensembl ENCODE 12.7 +21.5 21458 1.7 PKNOX1 SAP130 ARID4B FEZF1 RAD21 ZEB1 ZNF664 ZNF121 HIC1 ZFHX2 RPL21P97 SWAP70 WEE1 RN7SKP50 GC11P009745
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL21P97 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P97 Gene

Chromosome:
11
Start:
9,660,395 bp from pter
End:
9,660,956 bp from pter
Size:
562 bases
Orientation:
Plus strand

Genomic View for RPL21P97 Gene

Genes around RPL21P97 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P97 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P97 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P97 Gene

Proteins for RPL21P97 Gene

Post-translational modifications for RPL21P97 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P97 Gene

Domains & Families for RPL21P97 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P97 Gene

Function for RPL21P97 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P97 Gene

Localization for RPL21P97 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P97 Gene

Pathways & Interactions for RPL21P97 Gene

SuperPathways for RPL21P97 Gene

No Data Available

Interacting Proteins for RPL21P97 Gene

Gene Ontology (GO) - Biological Process for RPL21P97 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P97 Gene

Transcripts for RPL21P97 Gene

mRNA/cDNA for RPL21P97 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P97 Gene

No ASD Table

Relevant External Links for RPL21P97 Gene

GeneLoc Exon Structure for
RPL21P97
ECgene alternative splicing isoforms for
RPL21P97

Expression for RPL21P97 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P97 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P97 Gene:

RPL21P97
genes like me logo Genes that share expression patterns with RPL21P97: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P97 Gene

Orthologs for RPL21P97 Gene

Evolution for RPL21P97 Gene

ENSEMBL:
Gene Tree for RPL21P97 (if available)
TreeFam:
Gene Tree for RPL21P97 (if available)

No data available for Orthologs for RPL21P97 Gene

Paralogs for RPL21P97 Gene

No data available for Paralogs for RPL21P97 Gene

Variants for RPL21P97 Gene

Relevant External Links for RPL21P97 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P97

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P97 Gene

Disorders for RPL21P97 Gene

No disorders were found for RPL21P97 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P97 Gene

Publications for RPL21P97 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Large-scale mapping of human protein-protein interactions by mass spectrometry. (PMID: 17353931) Ewing R.M. … Figeys D. (Mol. Syst. Biol. 2007) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for RPL21P97 Gene

Sources for RPL21P97 Gene

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