Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL21P94 Gene

Aliases for RPL21P94 Gene

  • Ribosomal Protein L21 Pseudogene 94 2 3
  • RPL21_39_1117 3
  • RP11-732A19.1 5

External Ids for RPL21P94 Gene

Previous GeneCards Identifiers for RPL21P94 Gene

  • GC11U901249

Summaries for RPL21P94 Gene

GeneCards Summary for RPL21P94 Gene

RPL21P94 (Ribosomal Protein L21 Pseudogene 94) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P94 Gene

Genomics for RPL21P94 Gene

Regulatory Elements for RPL21P94 Gene

Enhancers for RPL21P94 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F006568 1.2 Ensembl ENCODE 10.6 +117.8 117810 0.8 HDAC1 PKNOX1 SIN3A CHAMP1 FOS ZNF263 ZBTB2 NCOA1 ZEB2 CREB3 ILK RRP8 MRPL17 RPL21P94 ENSG00000254400 APBB1 SMPD1 PIR42127 DNHD1
GH11F006634 1.1 Ensembl ENCODE 11.1 +50.7 50675 3.1 CBX3 RAD21 RARA ZNF366 ETV6 CREM EGR2 NR2F2 SMARCA4 PBX2 ILK MRPL17 RPL21P94 RRP8 DCHS1 ENSG00000255410
GH11F006616 1.1 ENCODE 10.7 +68.0 67994 3.6 PKNOX1 ARNT MLX WRNIP1 ARID4B SIN3A DMAP1 YY1 ZNF143 FOS LOC644169 MRPL17 RPL21P94 DCHS1 ILK ENSG00000255680 TAF10
GH11F006598 1 ENCODE 10.7 +87.0 86973 2.3 PKNOX1 ATF1 MLX ARID4B SIN3A DMAP1 YY1 GLIS2 ZNF143 ZNF263 RRP8 MRPL17 RPL21P94 ENSG00000255410 PIR55036 PIR42127
GH11F006531 0.8 ENCODE 11.1 +155.0 154956 0.2 ELF3 HDGF CTCF ARNT TEAD4 RAD21 TEAD3 ZNF316 FOXK2 NCOR1 RRP8 ILK MRPL17 RPL21P94 ENSG00000254641 TAF10 ENSG00000255410 ARFIP2 TIMM10B APBB1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P94 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P94 Gene

Chromosome:
11
Start:
6,685,846 bp from pter
End:
6,686,411 bp from pter
Size:
566 bases
Orientation:
Minus strand

Genomic View for RPL21P94 Gene

Genes around RPL21P94 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P94 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P94 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P94 Gene

Proteins for RPL21P94 Gene

Post-translational modifications for RPL21P94 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P94 Gene

Domains & Families for RPL21P94 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P94 Gene

Function for RPL21P94 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P94 Gene

Localization for RPL21P94 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P94 Gene

Pathways & Interactions for RPL21P94 Gene

SuperPathways for RPL21P94 Gene

No Data Available

Interacting Proteins for RPL21P94 Gene

Gene Ontology (GO) - Biological Process for RPL21P94 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P94 Gene

Transcripts for RPL21P94 Gene

mRNA/cDNA for RPL21P94 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P94 Gene

No ASD Table

Relevant External Links for RPL21P94 Gene

GeneLoc Exon Structure for
RPL21P94
ECgene alternative splicing isoforms for
RPL21P94

Expression for RPL21P94 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P94 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P94 Gene

This gene is overexpressed in Spleen (x6.5).

NURSA nuclear receptor signaling pathways regulating expression of RPL21P94 Gene:

RPL21P94
genes like me logo Genes that share expression patterns with RPL21P94: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P94 Gene

Orthologs for RPL21P94 Gene

Evolution for RPL21P94 Gene

ENSEMBL:
Gene Tree for RPL21P94 (if available)
TreeFam:
Gene Tree for RPL21P94 (if available)

No data available for Orthologs for RPL21P94 Gene

Paralogs for RPL21P94 Gene

No data available for Paralogs for RPL21P94 Gene

Variants for RPL21P94 Gene

Relevant External Links for RPL21P94 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P94

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P94 Gene

Disorders for RPL21P94 Gene

Relevant External Links for RPL21P94

Genetic Association Database (GAD)
RPL21P94

No disorders were found for RPL21P94 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P94 Gene

Publications for RPL21P94 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk J.B. … O'Connor G.T. (BMC Med. Genet. 2007) 46 64

Products for RPL21P94 Gene

Sources for RPL21P94 Gene

Content
Loading form....