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Aliases for RPL21P86 Gene

Aliases for RPL21P86 Gene

  • Ribosomal Protein L21 Pseudogene 86 2 3
  • RP11-476B13.2 5
  • RPL21_34_998 3

External Ids for RPL21P86 Gene

Previous GeneCards Identifiers for RPL21P86 Gene

  • GC09U901254
  • GC09M095440

Summaries for RPL21P86 Gene

GeneCards Summary for RPL21P86 Gene

RPL21P86 (Ribosomal Protein L21 Pseudogene 86) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P86 Gene

Genomics for RPL21P86 Gene

Regulatory Elements for RPL21P86 Gene

Enhancers for RPL21P86 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F092745 1.4 Ensembl ENCODE 16.3 -70.6 -70554 5.6 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF302 NOL8 PHF2 ZNF484 CENPP MTND4P15 LINC00475 SPTLC1 RPL21P86 SNX18P2 LOC101927993
GH09F092145 1.3 Ensembl ENCODE 16.2 +530.1 530057 3.5 HDGF PKNOX1 ARNT CREB3L1 YBX1 ZNF2 ZNF207 FOS SP3 REST NOL8 MTND4P15 ENSG00000236115 HSPE1P22 RPL21P82 RPL21P86 SNX18P2 LOC101927993 SPTLC1 MTCO3P29
GH09F092323 1.2 ENCODE 16.2 +352.0 352016 3.0 PKNOX1 ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 CENPP NOL8 ENSG00000236115 HSPE1P22 RPL21P82 RPL21P86 SNX18P2 LOC101927993 SPTLC1 ASPN
GH09F093672 0.5 FANTOM5 16.2 -995.2 -995220 0.3 CTBP1 ZEB2 ZNF645 ZEB1 ENSG00000231990 LOC101927993 MIRLET7DHG SNX18P2 RPL21P86 ENSG00000237385 PHF2 MIR548AU LOC101928014
GH09F092680 0.8 FANTOM5 ENCODE 0.8 -3.3 -3305 1.3 RFX1 HLF NR2F1 GLIS1 CEBPB CEBPG CENPP PHF2 IPPK GC09P092681 RPL21P86
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P86 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P86 Gene

Chromosome:
9
Start:
92,676,897 bp from pter
End:
92,677,447 bp from pter
Size:
551 bases
Orientation:
Minus strand

Genomic View for RPL21P86 Gene

Genes around RPL21P86 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P86 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P86 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P86 Gene

Proteins for RPL21P86 Gene

Post-translational modifications for RPL21P86 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P86 Gene

Domains & Families for RPL21P86 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P86 Gene

Function for RPL21P86 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P86 Gene

Localization for RPL21P86 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P86 Gene

Pathways & Interactions for RPL21P86 Gene

SuperPathways for RPL21P86 Gene

No Data Available

Interacting Proteins for RPL21P86 Gene

Gene Ontology (GO) - Biological Process for RPL21P86 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P86 Gene

Transcripts for RPL21P86 Gene

mRNA/cDNA for RPL21P86 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P86 Gene

No ASD Table

Relevant External Links for RPL21P86 Gene

GeneLoc Exon Structure for
RPL21P86
ECgene alternative splicing isoforms for
RPL21P86

Expression for RPL21P86 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P86 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P86 Gene

This gene is overexpressed in Testis (x40.7), Skin - Sun Exposed (Lower leg) (x6.2), and Skin - Not Sun Exposed (Suprapubic) (x6.1).

NURSA nuclear receptor signaling pathways regulating expression of RPL21P86 Gene:

RPL21P86
genes like me logo Genes that share expression patterns with RPL21P86: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P86 Gene

Orthologs for RPL21P86 Gene

Evolution for RPL21P86 Gene

ENSEMBL:
Gene Tree for RPL21P86 (if available)
TreeFam:
Gene Tree for RPL21P86 (if available)

No data available for Orthologs for RPL21P86 Gene

Paralogs for RPL21P86 Gene

No data available for Paralogs for RPL21P86 Gene

Variants for RPL21P86 Gene

Relevant External Links for RPL21P86 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P86

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P86 Gene

Disorders for RPL21P86 Gene

No disorders were found for RPL21P86 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P86 Gene

Publications for RPL21P86 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL21P86 Gene

Sources for RPL21P86 Gene

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