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Aliases for RPL21P85 Gene

Subcategory (RNA class) for RPL21P85 Gene


Aliases for RPL21P85 Gene

  • Ribosomal Protein L21 Pseudogene 85 2 3
  • RP11-317B17.3 5
  • RPL21_33_996 3

External Ids for RPL21P85 Gene

ORGUL Members for RPL21P85 Gene

Previous GeneCards Identifiers for RPL21P85 Gene

  • GC09U901267
  • GC09M091100

Summaries for RPL21P85 Gene

GeneCards Summary for RPL21P85 Gene

RPL21P85 (Ribosomal Protein L21 Pseudogene 85) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P85 Gene

Genomics for RPL21P85 Gene

Regulatory Elements for RPL21P85 Gene

Enhancers for RPL21P85 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F088481 0.5 FANTOM5 0.8 +3.6 3586 0.3 NXNL2 RPL21P85 PIR61508
GH09F088486 0.4 ENCODE 0.8 -1.7 -1739 0.9 ZNF263 MTA2 IKZF1 NBN TCF7 MLLT1 NFXL1 ZIC2 SPIN1 RPL21P85 LOC105376134
GH09F088475 0.8 Ensembl ENCODE 0.4 +8.0 8035 3.2 PKNOX1 WRNIP1 JUN SIN3A BMI1 EBF1 ZBTB40 RFX5 ZNF316 FOS SPIN1 NXNL2 PIR61508 RPL21P85
GH09F088510 0.3 FANTOM5 0.3 -25.0 -25031 0.3 NXNL2 LOC105376134 RPL21P85
GH09F088511 0.2 ENCODE 0.3 -26.7 -26740 0.6 BHLHE40 FOS NXNL2 LOC105376134 RPL21P85
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL21P85 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P85 Gene

88,484,852 bp from pter
88,485,325 bp from pter
474 bases
Minus strand

Genomic View for RPL21P85 Gene

Genes around RPL21P85 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P85 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P85 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P85 Gene

Proteins for RPL21P85 Gene

Post-translational modifications for RPL21P85 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P85 Gene

Domains & Families for RPL21P85 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P85 Gene

Function for RPL21P85 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P85 Gene

Localization for RPL21P85 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P85 Gene

Pathways & Interactions for RPL21P85 Gene

SuperPathways for RPL21P85 Gene

No Data Available

Interacting Proteins for RPL21P85 Gene

Gene Ontology (GO) - Biological Process for RPL21P85 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL21P85 Gene

Transcripts for RPL21P85 Gene

mRNA/cDNA for RPL21P85 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P85 Gene

No ASD Table

Relevant External Links for RPL21P85 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL21P85 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P85 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P85 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of RPL21P85 Gene:

genes like me logo Genes that share expression patterns with RPL21P85: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P85 Gene

Orthologs for RPL21P85 Gene

Evolution for RPL21P85 Gene

Gene Tree for RPL21P85 (if available)
Gene Tree for RPL21P85 (if available)

No data available for Orthologs for RPL21P85 Gene

Paralogs for RPL21P85 Gene

No data available for Paralogs for RPL21P85 Gene

Variants for RPL21P85 Gene

Relevant External Links for RPL21P85 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P85 Gene

Disorders for RPL21P85 Gene

No disorders were found for RPL21P85 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P85 Gene

Publications for RPL21P85 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL21P85 Gene

Sources for RPL21P85 Gene

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