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Aliases for RPL21P84 Gene

Subcategory (RNA class) for RPL21P84 Gene

lncRNA

Aliases for RPL21P84 Gene

  • Ribosomal Protein L21 Pseudogene 84 2 3
  • RPL21_32_987 3
  • RP11-336N8.3 5

External Ids for RPL21P84 Gene

ORGUL Members for RPL21P84 Gene

Previous GeneCards Identifiers for RPL21P84 Gene

  • GC09U901249
  • GC09M080796

Summaries for RPL21P84 Gene

GeneCards Summary for RPL21P84 Gene

RPL21P84 (Ribosomal Protein L21 Pseudogene 84) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P84 Gene

Genomics for RPL21P84 Gene

Regulatory Elements for RPL21P84 Gene

Enhancers for RPL21P84 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F078187 1.2 FANTOM5 Ensembl ENCODE 0.4 -7.3 -7342 0.9 CEP78 PSAT1 RPL21P84 ENSG00000234819
GH09F078189 0.2 ENCODE 0.4 -9.2 -9158 0.1 CEP78 RPL21P84 ENSG00000234819
GH09F078190 0.5 ENCODE 0.4 -9.0 -8967 0.2 CEP78 RPL21P84 ENSG00000234819
GH09F078196 0.7 Ensembl 0.3 -15.7 -15708 0.8 IKZF1 EED FOS SPI1 CEP78 RPL21P84 ENSG00000234819
GH09F078200 0.7 Ensembl ENCODE 0.3 -20.6 -20608 1.4 ZFHX2 ZSCAN16 SP5 FOXA3 IKZF1 GABPB1 PRDM10 EGR2 CEP78 PSAT1 ENSG00000234819 RPL21P84
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL21P84 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P84 Gene

Chromosome:
9
Start:
78,180,180 bp from pter
End:
78,180,693 bp from pter
Size:
514 bases
Orientation:
Minus strand

Genomic View for RPL21P84 Gene

Genes around RPL21P84 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P84 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P84 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P84 Gene

Proteins for RPL21P84 Gene

Post-translational modifications for RPL21P84 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P84 Gene

Domains & Families for RPL21P84 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P84 Gene

Function for RPL21P84 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P84 Gene

Localization for RPL21P84 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P84 Gene

Pathways & Interactions for RPL21P84 Gene

SuperPathways for RPL21P84 Gene

No Data Available

Interacting Proteins for RPL21P84 Gene

Gene Ontology (GO) - Biological Process for RPL21P84 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P84 Gene

Transcripts for RPL21P84 Gene

mRNA/cDNA for RPL21P84 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P84 Gene

No ASD Table

Relevant External Links for RPL21P84 Gene

GeneLoc Exon Structure for
RPL21P84
ECgene alternative splicing isoforms for
RPL21P84

Expression for RPL21P84 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P84 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P84 Gene:

RPL21P84
genes like me logo Genes that share expression patterns with RPL21P84: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P84 Gene

Orthologs for RPL21P84 Gene

Evolution for RPL21P84 Gene

ENSEMBL:
Gene Tree for RPL21P84 (if available)
TreeFam:
Gene Tree for RPL21P84 (if available)

No data available for Orthologs for RPL21P84 Gene

Paralogs for RPL21P84 Gene

No data available for Paralogs for RPL21P84 Gene

Variants for RPL21P84 Gene

Relevant External Links for RPL21P84 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P84

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P84 Gene

Disorders for RPL21P84 Gene

No disorders were found for RPL21P84 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P84 Gene

Publications for RPL21P84 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL21P84 Gene

Sources for RPL21P84 Gene

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