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Aliases for RPL21P83 Gene

Aliases for RPL21P83 Gene

  • Ribosomal Protein L21 Pseudogene 83 2 3
  • RP11-405L18.4 5
  • RPL21_31_978 3

External Ids for RPL21P83 Gene

Previous GeneCards Identifiers for RPL21P83 Gene

  • GC09U901226
  • GC09M037491
  • GC09M037492

Summaries for RPL21P83 Gene

GeneCards Summary for RPL21P83 Gene

RPL21P83 (Ribosomal Protein L21 Pseudogene 83) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P83 Gene

Genomics for RPL21P83 Gene

Regulatory Elements for RPL21P83 Gene

Enhancers for RPL21P83 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F037485 0.5 ENCODE 44.6 +4.1 4133 3.5 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 FOS RPL21P83 POLR1E ZBTB5 FBXO10 EXOSC3 ENSG00000234160 ENSG00000256966 TOMM5 FRMPD1 GRHPR
GH09F037501 0.4 ENCODE 44.2 -12.5 -12549 3.8 HLF CEBPB RAD21 YY1 RARA NR2F2 NFIL3 POLR2A ATF3 CEBPA RPL21P83 POLR1E FBXO10 ZBTB5 PIR42939 PIR55770
GH09F037564 0.5 Ensembl ENCODE 17.9 -75.1 -75092 2.4 CBFB CHD1 JUNB EBF1 YBX1 TBX21 CBX5 POLR2A NFYB EED RPL21P83 FRMPD1 POLR1E FBXO10 GC09M037564 PIR31436
GH09F037463 0.7 Ensembl ENCODE 15.5 +24.7 24669 5.8 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF766 ZBTB5 EXOSC3 RPL21P83 GRHPR TMX2P1 KCTD9P3
GH09F037470 1.3 Ensembl ENCODE 10.8 +18.7 18749 3.6 TBP HDAC1 SIN3A RFX5 GTF3C2 ZNF335 ZNF366 RCOR1 FOS ZNF362 ZBTB5 EXOSC3 ENSG00000234160 RPL21P83 TMX2P1 KCTD9P3
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL21P83 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P83 Gene

Chromosome:
9
Start:
37,490,389 bp from pter
End:
37,490,933 bp from pter
Size:
545 bases
Orientation:
Minus strand

Genomic View for RPL21P83 Gene

Genes around RPL21P83 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P83 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P83 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P83 Gene

Proteins for RPL21P83 Gene

Post-translational modifications for RPL21P83 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P83 Gene

Domains & Families for RPL21P83 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P83 Gene

Function for RPL21P83 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P83 Gene

Localization for RPL21P83 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P83 Gene

Pathways & Interactions for RPL21P83 Gene

SuperPathways for RPL21P83 Gene

No Data Available

Interacting Proteins for RPL21P83 Gene

Gene Ontology (GO) - Biological Process for RPL21P83 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P83 Gene

Transcripts for RPL21P83 Gene

mRNA/cDNA for RPL21P83 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P83 Gene

No ASD Table

Relevant External Links for RPL21P83 Gene

GeneLoc Exon Structure for
RPL21P83
ECgene alternative splicing isoforms for
RPL21P83

Expression for RPL21P83 Gene

mRNA expression in normal human tissues for RPL21P83 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P83 Gene

This gene is overexpressed in Liver (x5.9).

NURSA nuclear receptor signaling pathways regulating expression of RPL21P83 Gene:

RPL21P83
genes like me logo Genes that share expression patterns with RPL21P83: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P83 Gene

Orthologs for RPL21P83 Gene

Evolution for RPL21P83 Gene

ENSEMBL:
Gene Tree for RPL21P83 (if available)
TreeFam:
Gene Tree for RPL21P83 (if available)

No data available for Orthologs for RPL21P83 Gene

Paralogs for RPL21P83 Gene

No data available for Paralogs for RPL21P83 Gene

Variants for RPL21P83 Gene

Relevant External Links for RPL21P83 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P83

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P83 Gene

Disorders for RPL21P83 Gene

No disorders were found for RPL21P83 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P83 Gene

Publications for RPL21P83 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL21P83 Gene

Sources for RPL21P83 Gene

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