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Aliases for RPL21P80 Gene

Aliases for RPL21P80 Gene

  • Ribosomal Protein L21 Pseudogene 80 2 3
  • RPL21_32_892 3
  • AC087343.1 5

External Ids for RPL21P80 Gene

Previous GeneCards Identifiers for RPL21P80 Gene

  • GC08P034732

Summaries for RPL21P80 Gene

GeneCards Summary for RPL21P80 Gene

RPL21P80 (Ribosomal Protein L21 Pseudogene 80) is a Pseudogene.

Additional gene information for RPL21P80 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P80 Gene

Genomics for RPL21P80 Gene

Regulatory Elements for RPL21P80 Gene

Enhancers for RPL21P80 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H034891 0.7 ENCODE 0.4 +17.3 17258 0 CTCF ZNF654 NR2F1 MAX REST MNT ZNF2 RAD21 SMC3 NR2F6 RPL21P80 LOC105379368
GH08H034905 0.5 ENCODE 0.3 +33.1 33103 3 POLR2A POU5F1 CTBP2 EZH2 ETS1 RPL21P80 LOC105379368
GH08H034925 0.6 ENCODE 0.2 +51.7 51711 1 JUND POLR2A JUN STAT3 FOXP2 EP300 LOC105379368 RPL21P80
GH08H034859 0.2 ENCODE 0.4 -13.6 -13603 1 RPL21P80 LINC01288
GH08H034846 0.2 ENCODE 0.3 -27.1 -27083 0 RPL21P80 LINC01288
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P80 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P80 Gene

Chromosome:
8
Start:
34,874,120 bp from pter
End:
34,874,680 bp from pter
Size:
561 bases
Orientation:
Plus strand

Genomic View for RPL21P80 Gene

Genes around RPL21P80 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P80 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P80 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P80 Gene

Proteins for RPL21P80 Gene

Post-translational modifications for RPL21P80 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P80 Gene

Domains & Families for RPL21P80 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P80 Gene

Function for RPL21P80 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL21P80
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P80 Gene

Localization for RPL21P80 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P80 Gene

Pathways & Interactions for RPL21P80 Gene

SuperPathways for RPL21P80 Gene

No Data Available

Interacting Proteins for RPL21P80 Gene

Gene Ontology (GO) - Biological Process for RPL21P80 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P80 Gene

Drugs & Compounds for RPL21P80 Gene

No Compound Related Data Available

Transcripts for RPL21P80 Gene

mRNA/cDNA for RPL21P80 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL21P80
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P80 Gene

No ASD Table

Relevant External Links for RPL21P80 Gene

GeneLoc Exon Structure for
RPL21P80
ECgene alternative splicing isoforms for
RPL21P80

Expression for RPL21P80 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P80 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P80 Gene:

RPL21P80
genes like me logo Genes that share expression patterns with RPL21P80: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P80 Gene

Orthologs for RPL21P80 Gene

Evolution for RPL21P80 Gene

ENSEMBL:
Gene Tree for RPL21P80 (if available)
TreeFam:
Gene Tree for RPL21P80 (if available)

No data available for Orthologs for RPL21P80 Gene

Paralogs for RPL21P80 Gene

No data available for Paralogs for RPL21P80 Gene

Variants for RPL21P80 Gene

Relevant External Links for RPL21P80 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P80

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P80 Gene

Disorders for RPL21P80 Gene

Relevant External Links for RPL21P80

Genetic Association Database (GAD)
RPL21P80

No disorders were found for RPL21P80 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P80 Gene

Publications for RPL21P80 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 45 60

Products for RPL21P80 Gene

Sources for RPL21P80 Gene

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