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Aliases for RPL21P65 Gene

Aliases for RPL21P65 Gene

  • Ribosomal Protein L21 Pseudogene 65 2 3 5
  • RPL21_26_729 3

External Ids for RPL21P65 Gene

Previous GeneCards Identifiers for RPL21P65 Gene

  • GC06U901583
  • GC06P107091
  • GC06P107092
  • GC06P107093
  • GC06P107094
  • GC06P107095
  • GC06P107096
  • GC06P107097
  • GC06P107098

Summaries for RPL21P65 Gene

GeneCards Summary for RPL21P65 Gene

RPL21P65 (Ribosomal Protein L21 Pseudogene 65) is a Pseudogene.

Additional gene information for RPL21P65 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P65 Gene

Genomics for RPL21P65 Gene

Regulatory Elements for RPL21P65 Gene

Enhancers for RPL21P65 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H106636 1.2 Ensembl ENCODE dbSUPER 0.7 -4.7 -4673 2.6 PKNOX1 BMI1 BATF RUNX3 IKZF2 CREM L3MBTL2 ZBED1 JUNB TRIM22 QRSL1 RNU6-527P LINC02532 MIR587 RPL21P65 RTN4IP1
GH06H106666 0.9 ENCODE dbSUPER 0.3 +24.8 24822 1.4 MAFG JUNB EBF1 BATF ZNF316 MAFF POLR2A IKZF1 MAFK EMSY QRSL1 GC06P106672 RPL21P65
GH06H106660 0.5 ENCODE dbSUPER 0.4 +17.7 17681 0.2 GC06P106672 RPL21P65
GH06H106648 0.4 dbSUPER 0.4 +6.9 6901 2.4 SPI1 QRSL1 LINC02532 MIR587 RPL21P65 GC06P106672
GH06H106662 0.4 dbSUPER 0.3 +20.7 20714 1.5 SPI1 GC06P106672 RPL21P65
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P65 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P65 Gene

Genomic Locations for RPL21P65 Gene
chr6:106,642,420-106,642,959
(GRCh38/hg38)
Size:
540 bases
Orientation:
Plus strand
chr6:107,090,295-107,090,834
(GRCh37/hg19)

Genomic View for RPL21P65 Gene

Genes around RPL21P65 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P65 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P65 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P65 Gene

Proteins for RPL21P65 Gene

Post-translational modifications for RPL21P65 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P65 Gene

Domains & Families for RPL21P65 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P65 Gene

Function for RPL21P65 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P65 Gene

Localization for RPL21P65 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P65 Gene

Pathways & Interactions for RPL21P65 Gene

SuperPathways for RPL21P65 Gene

No Data Available

Interacting Proteins for RPL21P65 Gene

Gene Ontology (GO) - Biological Process for RPL21P65 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P65 Gene

Drugs & Compounds for RPL21P65 Gene

No Compound Related Data Available

Transcripts for RPL21P65 Gene

mRNA/cDNA for RPL21P65 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P65 Gene

No ASD Table

Relevant External Links for RPL21P65 Gene

GeneLoc Exon Structure for
RPL21P65
ECgene alternative splicing isoforms for
RPL21P65

Expression for RPL21P65 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P65 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P65 Gene:

RPL21P65
genes like me logo Genes that share expression patterns with RPL21P65: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P65 Gene

Orthologs for RPL21P65 Gene

Evolution for RPL21P65 Gene

ENSEMBL:
Gene Tree for RPL21P65 (if available)
TreeFam:
Gene Tree for RPL21P65 (if available)

No data available for Orthologs for RPL21P65 Gene

Paralogs for RPL21P65 Gene

No data available for Paralogs for RPL21P65 Gene

Variants for RPL21P65 Gene

Relevant External Links for RPL21P65 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P65

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P65 Gene

Disorders for RPL21P65 Gene

Relevant External Links for RPL21P65

Genetic Association Database (GAD)
RPL21P65

No disorders were found for RPL21P65 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P65 Gene

Publications for RPL21P65 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 45 60

Products for RPL21P65 Gene

Sources for RPL21P65 Gene

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