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Aliases for RPL21P60 Gene

Aliases for RPL21P60 Gene

  • Ribosomal Protein L21 Pseudogene 60 2 3
  • RPL21_23_641 3
  • CTD-2301A4.3 5

External Ids for RPL21P60 Gene

Previous GeneCards Identifiers for RPL21P60 Gene

  • GC05U901115
  • GC05P176692

Summaries for RPL21P60 Gene

GeneCards Summary for RPL21P60 Gene

RPL21P60 (Ribosomal Protein L21 Pseudogene 60) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P60 Gene

Genomics for RPL21P60 Gene

Regulatory Elements for RPL21P60 Gene

Enhancers for RPL21P60 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F177021 1 ENCODE 30.6 -242.2 -242186 2.7 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF416 FAF2 ENSG00000250909 ENSG00000251414 ENSG00000247679 ZNF346 LOC202181 ZNF346-IT1 RPL21P60 B4GALT7 PRMT1P1
GH05F177837 0.6 Ensembl 27.8 +572.9 572880 0.4 ZFP64 ZNF302 ZNF138 ZNF354C ZNF366 KLF7 FOS ZNF202 ZNF680 ZNF654 ENSG00000247679 LOC202181 ZNF346-IT1 RPL21P60 ZNF346 CLK4 HNRNPAB B4GALT7 SUDS3P1 PRMT1P1
GH05F177004 0.6 ENCODE 19.9 -258.5 -258505 2.7 ARNT WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 CBX5 ZNF143 ENSG00000250909 ENSG00000251414 FAF2 ENSG00000247679 ZNF346 LOC202181 RPL21P60 ZNF346-IT1 PRMT1P1 FGFR4
GH05F176386 1.2 ENCODE 19.9 -876.3 -876304 4.1 CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 FAF2 ENSG00000251414 HIGD2A ENSG00000250909 RPL21P60 MXD3 ZNF346 ZNF346-IT1 PRMT1P1 CLTB
GH05F178220 0.9 FANTOM5 ENCODE 13 +959.8 959822 8.6 CTCF KLF1 TEAD4 ZIC2 ZNF121 GLIS2 POLR2A SCRT2 PRDM10 ZNF548 HNRNPAB ZNF354C ZNF354B ZNF879 RPL21P60 ZFP2 ZNF454 LOC100130798 RMND5B COL23A1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL21P60 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P60 Gene

Chromosome:
5
Start:
177,264,726 bp from pter
End:
177,265,274 bp from pter
Size:
549 bases
Orientation:
Plus strand

Genomic View for RPL21P60 Gene

Genes around RPL21P60 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P60 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P60 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P60 Gene

Proteins for RPL21P60 Gene

Post-translational modifications for RPL21P60 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P60 Gene

Domains & Families for RPL21P60 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P60 Gene

Function for RPL21P60 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P60 Gene

Localization for RPL21P60 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P60 Gene

Pathways & Interactions for RPL21P60 Gene

SuperPathways for RPL21P60 Gene

No Data Available

Interacting Proteins for RPL21P60 Gene

Gene Ontology (GO) - Biological Process for RPL21P60 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P60 Gene

Transcripts for RPL21P60 Gene

mRNA/cDNA for RPL21P60 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P60 Gene

No ASD Table

Relevant External Links for RPL21P60 Gene

GeneLoc Exon Structure for
RPL21P60
ECgene alternative splicing isoforms for
RPL21P60

Expression for RPL21P60 Gene

mRNA expression in normal human tissues for RPL21P60 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P60 Gene

This gene is overexpressed in Testis (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of RPL21P60 Gene:

RPL21P60
genes like me logo Genes that share expression patterns with RPL21P60: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P60 Gene

Orthologs for RPL21P60 Gene

Evolution for RPL21P60 Gene

ENSEMBL:
Gene Tree for RPL21P60 (if available)
TreeFam:
Gene Tree for RPL21P60 (if available)

No data available for Orthologs for RPL21P60 Gene

Paralogs for RPL21P60 Gene

No data available for Paralogs for RPL21P60 Gene

Variants for RPL21P60 Gene

Relevant External Links for RPL21P60 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P60

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P60 Gene

Disorders for RPL21P60 Gene

No disorders were found for RPL21P60 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P60 Gene

Publications for RPL21P60 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL21P60 Gene

Sources for RPL21P60 Gene

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