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Aliases for RPL21P60 Gene

Aliases for RPL21P60 Gene

  • Ribosomal Protein L21 Pseudogene 60 2 3
  • RPL21_23_641 3
  • AC146507.2 5

External Ids for RPL21P60 Gene

Previous GeneCards Identifiers for RPL21P60 Gene

  • GC05U901115
  • GC05P176692

Summaries for RPL21P60 Gene

GeneCards Summary for RPL21P60 Gene

RPL21P60 (Ribosomal Protein L21 Pseudogene 60) is a Pseudogene.

Additional gene information for RPL21P60 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P60 Gene

Genomics for RPL21P60 Gene

GeneHancer (GH) Regulatory Elements for RPL21P60 Gene

Promoters and enhancers for RPL21P60 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I176386 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 36.8 -876.3 -876304 4.1 CLOCK FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 ZNF263 SP3 HIGD2A NOP16 FAF2 ENSG00000251414 ENSG00000250909 NSD1 RPL21P60 UIMC1 MXD3 ZNF346
GH05I178203 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 18.2 +945.0 945018 12.3 HDGF PKNOX1 SMAD1 ARNT ZFP64 ARID4B NEUROD1 SIN3A DMAP1 ZNF2 HNRNPAB ENSG00000247679 FAM193B ZNF879 LOC202181 ZNF354C ZFP2 ENSG00000254035 ZNF454 CLK4
GH05I177004 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 18.6 -258.5 -258504 2.7 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF213 ZNF207 ZNF143 UIMC1 FAF2 ENSG00000250909 ENSG00000251414 NSD1 FAM193B ENSG00000247679 ZNF346 LOC202181 ZNF346-IT1
GH05I176529 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 12.1 -730.4 -730427 10.3 HDGF PKNOX1 SMAD1 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 RNF44 GC05P176534 ENSG00000250909 NSD1 ENSG00000251414 FAF2 RPL21P60 ZNF346-IT1 UIMC1 CDHR2
GH05I178111 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.3 +855.4 855391 16.8 HDGF PKNOX1 SMAD1 ARNT ARID4B NEUROD1 SIN3A ZNF2 ZBTB7B IRF4 N4BP3 NSD1 ENSG00000247679 FAM193B ZNF354B CLK4 LOC202181 RMND5B HNRNPAB RPL21P60
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL21P60 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P60 Gene

Genomic Locations for RPL21P60 Gene
chr5:177,264,726-177,265,274
(GRCh38/hg38)
Size:
549 bases
Orientation:
Plus strand
chr5:176,691,727-176,692,275
(GRCh37/hg19)

Genomic View for RPL21P60 Gene

Genes around RPL21P60 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P60 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P60 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P60 Gene

Proteins for RPL21P60 Gene

Post-translational modifications for RPL21P60 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P60 Gene

Domains & Families for RPL21P60 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P60 Gene

Function for RPL21P60 Gene

Phenotypes From GWAS Catalog for RPL21P60 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P60 Gene

Localization for RPL21P60 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P60 Gene

Pathways & Interactions for RPL21P60 Gene

SuperPathways for RPL21P60 Gene

No Data Available

Interacting Proteins for RPL21P60 Gene

Gene Ontology (GO) - Biological Process for RPL21P60 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P60 Gene

Drugs & Compounds for RPL21P60 Gene

No Compound Related Data Available

Transcripts for RPL21P60 Gene

mRNA/cDNA for RPL21P60 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P60 Gene

No ASD Table

Relevant External Links for RPL21P60 Gene

GeneLoc Exon Structure for
RPL21P60
ECgene alternative splicing isoforms for
RPL21P60

Expression for RPL21P60 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P60 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P60 Gene

This gene is overexpressed in Testis (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of RPL21P60 Gene:

RPL21P60
genes like me logo Genes that share expression patterns with RPL21P60: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P60 Gene

Orthologs for RPL21P60 Gene

Evolution for RPL21P60 Gene

ENSEMBL:
Gene Tree for RPL21P60 (if available)
TreeFam:
Gene Tree for RPL21P60 (if available)

No data available for Orthologs for RPL21P60 Gene

Paralogs for RPL21P60 Gene

No data available for Paralogs for RPL21P60 Gene

Variants for RPL21P60 Gene

Additional Variant Information for RPL21P60 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P60

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P60 Gene

Disorders for RPL21P60 Gene

No disorders were found for RPL21P60 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P60 Gene

Publications for RPL21P60 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL21P60 Gene

Sources for RPL21P60 Gene

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