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Aliases for RPL21P58 Gene

Aliases for RPL21P58 Gene

  • Ribosomal Protein L21 Pseudogene 58 2 3
  • RPL21_22_606 3
  • AC010409.1 5

External Ids for RPL21P58 Gene

Previous GeneCards Identifiers for RPL21P58 Gene

  • GC05U901088
  • GC05M118882

Summaries for RPL21P58 Gene

GeneCards Summary for RPL21P58 Gene

RPL21P58 (Ribosomal Protein L21 Pseudogene 58) is a Pseudogene.

Additional gene information for RPL21P58 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P58 Gene

Genomics for RPL21P58 Gene

Regulatory Elements for RPL21P58 Gene

Enhancers for RPL21P58 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05H119537 0.8 ENCODE 0.4 +9.7 9725 0 PKNOX1 TBL1XR1 JUN BMI1 EBF1 BATF ZBTB40 RELA EED FOS RPL21P58 HSD17B4
GH05H119451 1.1 ENCODE 0.2 +94.7 94684 2 HDGF PKNOX1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 FAM170A HSD17B4 RPL21P58
GH05H119469 1 Ensembl ENCODE 0.2 +77.2 77229 1 CTCF NR2F1 CEBPB TRIM22 CEBPG RAD21 RELA POLR2A SMC3 POU5F1 HSD17B4 RPL21P58
GH05H119459 0.5 ENCODE 0.2 +88.5 88505 0 NFIL3 HLF POU5F1 ETS1 HSD17B4 RPL21P58
GH05H119500 0.3 FANTOM5 0.2 +46.8 46771 0 RPL21P58 HSD17B4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P58 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P58 Gene

Chromosome:
5
Start:
119,547,099 bp from pter
End:
119,547,645 bp from pter
Size:
547 bases
Orientation:
Minus strand

Genomic View for RPL21P58 Gene

Genes around RPL21P58 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P58 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P58 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P58 Gene

Proteins for RPL21P58 Gene

Post-translational modifications for RPL21P58 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P58 Gene

Domains & Families for RPL21P58 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P58 Gene

Function for RPL21P58 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL21P58
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P58 Gene

Localization for RPL21P58 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P58 Gene

Pathways & Interactions for RPL21P58 Gene

SuperPathways for RPL21P58 Gene

No Data Available

Interacting Proteins for RPL21P58 Gene

Gene Ontology (GO) - Biological Process for RPL21P58 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P58 Gene

Drugs & Compounds for RPL21P58 Gene

No Compound Related Data Available

Transcripts for RPL21P58 Gene

mRNA/cDNA for RPL21P58 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL21P58
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P58 Gene

No ASD Table

Relevant External Links for RPL21P58 Gene

GeneLoc Exon Structure for
RPL21P58
ECgene alternative splicing isoforms for
RPL21P58

Expression for RPL21P58 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P58 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P58 Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (x5.9), Brain - Cerebellar Hemisphere (x5.9), Brain - Cerebellum (x5.5), and Brain - Cortex (x5.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL21P58 Gene:

RPL21P58
genes like me logo Genes that share expression patterns with RPL21P58: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P58 Gene

Orthologs for RPL21P58 Gene

Evolution for RPL21P58 Gene

ENSEMBL:
Gene Tree for RPL21P58 (if available)
TreeFam:
Gene Tree for RPL21P58 (if available)

No data available for Orthologs for RPL21P58 Gene

Paralogs for RPL21P58 Gene

No data available for Paralogs for RPL21P58 Gene

Variants for RPL21P58 Gene

Relevant External Links for RPL21P58 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P58

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P58 Gene

Disorders for RPL21P58 Gene

No disorders were found for RPL21P58 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P58 Gene

Publications for RPL21P58 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPL21P58 Gene

Sources for RPL21P58 Gene

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