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Aliases for RPL21P52 Gene

Aliases for RPL21P52 Gene

  • Ribosomal Protein L21 Pseudogene 52 2 3
  • RPL21_16_474 3
  • RP11-731J8.1 5

External Ids for RPL21P52 Gene

Previous GeneCards Identifiers for RPL21P52 Gene

  • GC04M047189

Summaries for RPL21P52 Gene

GeneCards Summary for RPL21P52 Gene

RPL21P52 (Ribosomal Protein L21 Pseudogene 52) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P52 Gene

Genomics for RPL21P52 Gene

Regulatory Elements for RPL21P52 Gene

Enhancers for RPL21P52 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F047519 1.4 Ensembl ENCODE 11.7 -28.0 -28005 0.6 BMI1 EBF1 ZBTB40 RELA EED ETV6 CREM MTA2 CBFB TRIM22 ENSG00000248254 RPL21P52 ATP10D GC04P047550
GH04F047524 1 Ensembl ENCODE 11.1 -37.9 -37889 10.5 ZBTB40 EGR1 CBX5 FOS ETV6 CREM CBFB CEBPB JUNB TBX21 ATP10D ENSG00000248254 RPL21P52 GC04P047550
GH04F047493 1.2 FANTOM5 Ensembl 0.8 -2.1 -2129 0.9 TBP MTA2 SMAD5 ZBED1 CBFB JUNB BMI1 TBX21 EP300 POLR2A COMMD8 RPL21P52 GC04P047550
GH04F047498 0.8 Ensembl ENCODE 0.4 -8.2 -8153 2.8 MTA2 IKZF1 EED NBN CHD1 EBF1 TBX21 RELA YY1 COMMD8 ATP10D RPL21P52 GC04P047550
GH04F047509 1.2 Ensembl ENCODE 0.3 -19.4 -19398 2.2 CTCF TBP PKNOX1 BMI1 EBF1 RELA CBX5 SMC3 ETV6 CREM ATP10D RPL21P52 GC04P047550
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL21P52 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P52 Gene

Chromosome:
4
Start:
47,490,946 bp from pter
End:
47,491,503 bp from pter
Size:
558 bases
Orientation:
Minus strand

Genomic View for RPL21P52 Gene

Genes around RPL21P52 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P52 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P52 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P52 Gene

Proteins for RPL21P52 Gene

Post-translational modifications for RPL21P52 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P52 Gene

Domains & Families for RPL21P52 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P52 Gene

Function for RPL21P52 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P52 Gene

Localization for RPL21P52 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P52 Gene

Pathways & Interactions for RPL21P52 Gene

SuperPathways for RPL21P52 Gene

No Data Available

Interacting Proteins for RPL21P52 Gene

Gene Ontology (GO) - Biological Process for RPL21P52 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P52 Gene

Transcripts for RPL21P52 Gene

mRNA/cDNA for RPL21P52 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P52 Gene

No ASD Table

Relevant External Links for RPL21P52 Gene

GeneLoc Exon Structure for
RPL21P52
ECgene alternative splicing isoforms for
RPL21P52

Expression for RPL21P52 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P52 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P52 Gene:

RPL21P52
genes like me logo Genes that share expression patterns with RPL21P52: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P52 Gene

Orthologs for RPL21P52 Gene

Evolution for RPL21P52 Gene

ENSEMBL:
Gene Tree for RPL21P52 (if available)
TreeFam:
Gene Tree for RPL21P52 (if available)

No data available for Orthologs for RPL21P52 Gene

Paralogs for RPL21P52 Gene

No data available for Paralogs for RPL21P52 Gene

Variants for RPL21P52 Gene

Relevant External Links for RPL21P52 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P52

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P52 Gene

Disorders for RPL21P52 Gene

No disorders were found for RPL21P52 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P52 Gene

Publications for RPL21P52 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL21P52 Gene

Sources for RPL21P52 Gene

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