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Aliases for RPL21P50 Gene

Aliases for RPL21P50 Gene

  • Ribosomal Protein L21 Pseudogene 50 2 3 5
  • RPL21_18_516 3

External Ids for RPL21P50 Gene

Previous GeneCards Identifiers for RPL21P50 Gene

  • GC04U901011
  • GC04M124668

Summaries for RPL21P50 Gene

GeneCards Summary for RPL21P50 Gene

RPL21P50 (Ribosomal Protein L21 Pseudogene 50) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P50 Gene

Genomics for RPL21P50 Gene

Regulatory Elements for RPL21P50 Gene

Enhancers for RPL21P50 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G123748 0.9 Ensembl ENCODE 0.7 -3.7 -3714 2.8 ELF3 SOX13 GATAD2A TEAD1 ZIC2 RAD21 NR2F2 SMARCA4 GLIS1 KDM6A LINC01091 RPL21P50 ENSG00000250458
GH04G123782 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -39.4 -39435 6.2 BCOR ZSCAN4 TEAD4 ZMYM3 SCRT2 PRDM10 HOMEZ BHLHE40 NFIL3 JUND LINC01091 SPRY1 RPL21P50 ENSG00000250458
GH04G123776 0.9 ENCODE dbSUPER 0.3 -31.3 -31306 2.3 TRIM22 JUNB DPF2 TBX21 CBX5 IKZF1 ETV6 RELB IKZF2 ZZZ3 LINC01091 RPL21P50 ENSG00000250458
GH04G123811 1.2 Ensembl ENCODE dbSUPER 0.2 -65.5 -65534 1.2 FOXA2 NFIB ZSCAN4 MAFG MNT FOXA1 ZNF316 MAFF NFIC EMSY ENSG00000250458 RPL21P50
GH04G123829 1.2 Ensembl ENCODE dbSUPER 0.2 -86.2 -86168 5.2 JUN SIN3A RAD21 GATA2 HNF4G FOS MAFK BHLHE40 CEBPB NR2F2 LINC01091 ENSG00000250458 RPL21P50
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P50 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P50 Gene

Chromosome:
4
Start:
123,745,713 bp from pter
End:
123,746,267 bp from pter
Size:
555 bases
Orientation:
Minus strand

Genomic View for RPL21P50 Gene

Genes around RPL21P50 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P50 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P50 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P50 Gene

Proteins for RPL21P50 Gene

Post-translational modifications for RPL21P50 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P50 Gene

Domains & Families for RPL21P50 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P50 Gene

Function for RPL21P50 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P50 Gene

Localization for RPL21P50 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P50 Gene

Pathways & Interactions for RPL21P50 Gene

SuperPathways for RPL21P50 Gene

No Data Available

Interacting Proteins for RPL21P50 Gene

Gene Ontology (GO) - Biological Process for RPL21P50 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P50 Gene

Drugs & Compounds for RPL21P50 Gene

No Compound Related Data Available

Transcripts for RPL21P50 Gene

mRNA/cDNA for RPL21P50 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P50 Gene

No ASD Table

Relevant External Links for RPL21P50 Gene

GeneLoc Exon Structure for
RPL21P50
ECgene alternative splicing isoforms for
RPL21P50

Expression for RPL21P50 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P50 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P50 Gene:

RPL21P50
genes like me logo Genes that share expression patterns with RPL21P50: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P50 Gene

Orthologs for RPL21P50 Gene

Evolution for RPL21P50 Gene

ENSEMBL:
Gene Tree for RPL21P50 (if available)
TreeFam:
Gene Tree for RPL21P50 (if available)

No data available for Orthologs for RPL21P50 Gene

Paralogs for RPL21P50 Gene

No data available for Paralogs for RPL21P50 Gene

Variants for RPL21P50 Gene

Relevant External Links for RPL21P50 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P50

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P50 Gene

Disorders for RPL21P50 Gene

Relevant External Links for RPL21P50

Genetic Association Database (GAD)
RPL21P50

No disorders were found for RPL21P50 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P50 Gene

Publications for RPL21P50 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox C.S. … Atwood L.D. (BMC Med. Genet. 2007) 46 64
  3. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk J.B. … O'Connor G.T. (BMC Med. Genet. 2007) 46 64

Products for RPL21P50 Gene

Sources for RPL21P50 Gene

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