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Aliases for RPL21P49 Gene

Aliases for RPL21P49 Gene

  • Ribosomal Protein L21 Pseudogene 49 2 3
  • RPL21_18_504 3
  • AF213884.1 5

External Ids for RPL21P49 Gene

Previous GeneCards Identifiers for RPL21P49 Gene

  • GC04U901014
  • GC04P103584

Summaries for RPL21P49 Gene

GeneCards Summary for RPL21P49 Gene

RPL21P49 (Ribosomal Protein L21 Pseudogene 49) is a Pseudogene.

Additional gene information for RPL21P49 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P49 Gene

Genomics for RPL21P49 Gene

Regulatory Elements for RPL21P49 Gene

Enhancers for RPL21P49 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H102618 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -42.2 -42240 3 ELF3 TBP TBL1XR1 ARID4B SIN3A FEZF1 DMAP1 RAD21 YY1 ZNF766 MANBA LRRC37A15P KRT8P46 LOC105377347 RPL21P49
GH04H102627 1.2 FANTOM5 ENCODE dbSUPER 0.3 -34.6 -34555 1 PKNOX1 JUN JUNB BATF FOSL1 NFIC JUND POLR2A GLIS1 FOS NFKB1 SLC9B1 SLC39A8 UBE2D3 MANBA LOC105377347 RPL21P49
GH04H102625 1 Ensembl ENCODE 0.3 -36.9 -36881 0 HDGF CTCF RB1 MAX CEBPG YBX1 RAD21 ZNF366 SMC3 ZNF143 SLC9B1 LRRC37A15P KRT8P46 LOC105377347 RPL21P49
GH04H102630 0.8 ENCODE dbSUPER 0.3 -31.6 -31554 1 FOXA2 ZSCAN4 MAX HNF4A FOXA1 YY1 SLC9B1 CISD2 BDH2 LOC105377347 RPL21P49
GH04H102616 0.7 ENCODE dbSUPER 0.2 -45.7 -45723 0 POLR2A RCOR1 FOXP2 SLC9B1 NFKB1 LOC105377347 RPL21P49
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P49 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P49 Gene

Chromosome:
4
Start:
102,662,581 bp from pter
End:
102,663,116 bp from pter
Size:
536 bases
Orientation:
Plus strand

Genomic View for RPL21P49 Gene

Genes around RPL21P49 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P49 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P49 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P49 Gene

Proteins for RPL21P49 Gene

Post-translational modifications for RPL21P49 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P49 Gene

Domains & Families for RPL21P49 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P49 Gene

Function for RPL21P49 Gene

Phenotypes From GWAS Catalog for RPL21P49 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL21P49
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P49 Gene

Localization for RPL21P49 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P49 Gene

Pathways & Interactions for RPL21P49 Gene

SuperPathways for RPL21P49 Gene

No Data Available

Interacting Proteins for RPL21P49 Gene

Gene Ontology (GO) - Biological Process for RPL21P49 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P49 Gene

Drugs & Compounds for RPL21P49 Gene

No Compound Related Data Available

Transcripts for RPL21P49 Gene

mRNA/cDNA for RPL21P49 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL21P49
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P49 Gene

No ASD Table

Relevant External Links for RPL21P49 Gene

GeneLoc Exon Structure for
RPL21P49
ECgene alternative splicing isoforms for
RPL21P49

Expression for RPL21P49 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P49 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P49 Gene

This gene is overexpressed in Whole Blood (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL21P49 Gene:

RPL21P49
genes like me logo Genes that share expression patterns with RPL21P49: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P49 Gene

Orthologs for RPL21P49 Gene

Evolution for RPL21P49 Gene

ENSEMBL:
Gene Tree for RPL21P49 (if available)
TreeFam:
Gene Tree for RPL21P49 (if available)

No data available for Orthologs for RPL21P49 Gene

Paralogs for RPL21P49 Gene

No data available for Paralogs for RPL21P49 Gene

Variants for RPL21P49 Gene

Relevant External Links for RPL21P49 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P49

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P49 Gene

Disorders for RPL21P49 Gene

Relevant External Links for RPL21P49

Genetic Association Database (GAD)
RPL21P49

No disorders were found for RPL21P49 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P49 Gene

Publications for RPL21P49 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPL21P49 Gene

Sources for RPL21P49 Gene

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