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Aliases for RPL21P44 Gene

Aliases for RPL21P44 Gene

  • Ribosomal Protein L21 Pseudogene 44 2 3 5
  • RPL21_17_477 3

External Ids for RPL21P44 Gene

Previous GeneCards Identifiers for RPL21P44 Gene

  • GC04M054547
  • GC04M054851
  • GC04M050798

Summaries for RPL21P44 Gene

GeneCards Summary for RPL21P44 Gene

RPL21P44 (Ribosomal Protein L21 Pseudogene 44) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P44 Gene

Genomics for RPL21P44 Gene

Regulatory Elements for RPL21P44 Gene

Genomic Location for RPL21P44 Gene

Chromosome:
4
Start:
53,985,486 bp from pter
End:
53,987,282 bp from pter
Size:
1,797 bases
Orientation:
Minus strand

Genomic View for RPL21P44 Gene

Genes around RPL21P44 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P44 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P44 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P44 Gene

Proteins for RPL21P44 Gene

Post-translational modifications for RPL21P44 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P44 Gene

Domains & Families for RPL21P44 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P44 Gene

Function for RPL21P44 Gene

Phenotypes for RPL21P44 Gene

GenomeRNAi human phenotypes for RPL21P44:
genes like me logo Genes that share phenotypes with RPL21P44: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P44 Gene

Localization for RPL21P44 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P44 Gene

Pathways & Interactions for RPL21P44 Gene

SuperPathways for RPL21P44 Gene

No Data Available

Interacting Proteins for RPL21P44 Gene

Gene Ontology (GO) - Biological Process for RPL21P44 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P44 Gene

Drugs & Compounds for RPL21P44 Gene

No Compound Related Data Available

Transcripts for RPL21P44 Gene

mRNA/cDNA for RPL21P44 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPL21P44 Gene

Ribosomal protein L21 pseudogene 44:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P44 Gene

No ASD Table

Relevant External Links for RPL21P44 Gene

GeneLoc Exon Structure for
RPL21P44
ECgene alternative splicing isoforms for
RPL21P44

Expression for RPL21P44 Gene

mRNA expression in normal human tissues for RPL21P44 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P44 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x4.4) and Brain - Cerebellum (x4.1).

SOURCE GeneReport for Unigene cluster for RPL21P44 Gene Hs.452943

genes like me logo Genes that share expression patterns with RPL21P44: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RPL21P44 Gene

Orthologs for RPL21P44 Gene

Evolution for RPL21P44 Gene

ENSEMBL:
Gene Tree for RPL21P44 (if available)
TreeFam:
Gene Tree for RPL21P44 (if available)

No data available for Orthologs for RPL21P44 Gene

Paralogs for RPL21P44 Gene

No data available for Paralogs for RPL21P44 Gene

Variants for RPL21P44 Gene

Sequence variations from dbSNP and Humsavar for RPL21P44 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs6846538 -- 53,989,050(+) CTCCC(A/G)CTTCA upstream-variant-2KB
rs11722546 -- 53,987,951(+) TATGT(A/G)TGTGT upstream-variant-2KB
rs13133742 -- 53,988,548(+) AAGCA(G/T)GCCAC upstream-variant-2KB
rs13146026 -- 53,985,903(+) TGCAG(G/T)CAGTA nc-transcript-variant
rs59950563 -- 53,985,500(+) TTTTT(-/TT)GAGAC nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for RPL21P44 Gene

Variant ID Type Subtype PubMed ID
nsv879018 CNV Loss 21882294

Relevant External Links for RPL21P44 Gene

HapMap Linkage Disequilibrium report
RPL21P44

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPL21P44 Gene

Disorders for RPL21P44 Gene

Relevant External Links for RPL21P44

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPL21P44

No disorders were found for RPL21P44 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P44 Gene

Publications for RPL21P44 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 67
  2. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for RPL21P44 Gene

Sources for RPL21P44 Gene

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