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Aliases for RPL21P43 Gene

Aliases for RPL21P43 Gene

  • Ribosomal Protein L21 Pseudogene 43 2 3 5
  • RPL21_15_434 3

External Ids for RPL21P43 Gene

Previous GeneCards Identifiers for RPL21P43 Gene

  • GC03U901262
  • GC03M168577

Summaries for RPL21P43 Gene

GeneCards Summary for RPL21P43 Gene

RPL21P43 (Ribosomal Protein L21 Pseudogene 43) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P43 Gene

Genomics for RPL21P43 Gene

Regulatory Elements for RPL21P43 Gene

Enhancers for RPL21P43 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F168858 0.9 ENCODE 0.8 -1.1 -1141 3.4 ELF3 ZFP64 ARID4B YY1 GATA4 ZNF354C CREM MIXL1 THAP11 ZNF202 EGFEM1P ENSG00000270096 RPL22P1 ENSG00000270135 RPL21P43 LINC02082
GH03F168870 0.9 ENCODE 0.4 -12.6 -12566 3.2 PKNOX1 RAD21 RARA ZNF366 RCOR1 FOS CREM MIXL1 THAP11 PPARG RPL21P43 LINC02082
GH03F168877 1 Ensembl ENCODE 0.3 -18.8 -18754 1.0 HLF ZHX2 DPF2 GATAD2B RAD21 ZNF217 MBD2 GATA3 CTBP1 CBX1 EGFEM1P RPL21P43 LINC02082
GH03F168888 0.6 FANTOM5 0.3 -29.5 -29473 0.4 ZNF217 GATA3 BCL6 RAD21 LINC02082 RPL21P43
GH03F168883 0.6 ENCODE 0.3 -25.4 -25426 1.4 ZNF362 NFIA USF2 MAX MNT ZNF366 SCRT2 PRDM10 SP7 LINC02082 RPL21P43
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P43 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P43 Gene

Chromosome:
3
Start:
168,858,622 bp from pter
End:
168,859,172 bp from pter
Size:
551 bases
Orientation:
Minus strand

Genomic View for RPL21P43 Gene

Genes around RPL21P43 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P43 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P43 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P43 Gene

Proteins for RPL21P43 Gene

Post-translational modifications for RPL21P43 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P43 Gene

Domains & Families for RPL21P43 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P43 Gene

Function for RPL21P43 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P43 Gene

Localization for RPL21P43 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P43 Gene

Pathways & Interactions for RPL21P43 Gene

SuperPathways for RPL21P43 Gene

No Data Available

Interacting Proteins for RPL21P43 Gene

Gene Ontology (GO) - Biological Process for RPL21P43 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P43 Gene

Transcripts for RPL21P43 Gene

mRNA/cDNA for RPL21P43 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P43 Gene

No ASD Table

Relevant External Links for RPL21P43 Gene

GeneLoc Exon Structure for
RPL21P43
ECgene alternative splicing isoforms for
RPL21P43

Expression for RPL21P43 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P43 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P43 Gene:

RPL21P43
genes like me logo Genes that share expression patterns with RPL21P43: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P43 Gene

Orthologs for RPL21P43 Gene

Evolution for RPL21P43 Gene

ENSEMBL:
Gene Tree for RPL21P43 (if available)
TreeFam:
Gene Tree for RPL21P43 (if available)

No data available for Orthologs for RPL21P43 Gene

Paralogs for RPL21P43 Gene

No data available for Paralogs for RPL21P43 Gene

Variants for RPL21P43 Gene

Relevant External Links for RPL21P43 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P43

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P43 Gene

Disorders for RPL21P43 Gene

Relevant External Links for RPL21P43

Genetic Association Database (GAD)
RPL21P43

No disorders were found for RPL21P43 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P43 Gene

Publications for RPL21P43 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. A genome-wide association study of aging. (PMID: 21782286) Walter S. … Franceschini N. (Neurobiol. Aging 2011) 46 64
  3. Genome-wide association study of electrocardiographic and heart rate variability traits: the Framingham Heart Study. (PMID: 17903306) Newton-Cheh C. … Larson M.G. (BMC Med. Genet. 2007) 46 64

Products for RPL21P43 Gene

Sources for RPL21P43 Gene

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