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Aliases for RPL21P43 Gene

Aliases for RPL21P43 Gene

  • Ribosomal Protein L21 Pseudogene 43 2 3 5
  • RPL21_15_434 3

External Ids for RPL21P43 Gene

Previous GeneCards Identifiers for RPL21P43 Gene

  • GC03U901262
  • GC03M168577

Summaries for RPL21P43 Gene

GeneCards Summary for RPL21P43 Gene

RPL21P43 (Ribosomal Protein L21 Pseudogene 43) is a Pseudogene.

Additional gene information for RPL21P43 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P43 Gene

Genomics for RPL21P43 Gene

Regulatory Elements for RPL21P43 Gene

Enhancers for RPL21P43 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H168858 1.1 ENCODE dbSUPER 0.7 -1.1 -1141 3.4 ELF3 FOXA2 ARID4B BATF YY1 CREM MIXL1 THAP11 CEBPB PPARG EGFEM1P RPL21P43 LINC02082
GH03H168870 1.2 ENCODE dbSUPER 0.4 -12.6 -12566 3.2 PKNOX1 FOXA2 NFIB NFXL1 RARA ZNF366 SMARCC2 FOS RCOR1 CREM RPL21P43 LINC02082
GH03H168877 0.7 ENCODE 0.4 -18.7 -18725 0.9 SMARCE1 NFIB HLF CHD1 ELF1 GATAD2B DPF2 ZNF217 CTBP1 GATA3 RPL21P43 LINC02082
GH03H168876 0.5 ENCODE 0.4 -17.6 -17625 1.1 PKNOX1 GATA3 JUN RPL21P43 LINC02082
GH03H168888 0.6 FANTOM5 0.3 -29.5 -29473 0.4 ZNF217 GATA3 BCL6 FOXA1 LINC02082 RPL21P43
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P43 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P43 Gene

Genomic Locations for RPL21P43 Gene
chr3:168,858,622-168,859,172
(GRCh38/hg38)
Size:
551 bases
Orientation:
Minus strand
chr3:168,576,410-168,576,960
(GRCh37/hg19)

Genomic View for RPL21P43 Gene

Genes around RPL21P43 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P43 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P43 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P43 Gene

Proteins for RPL21P43 Gene

Post-translational modifications for RPL21P43 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P43 Gene

Domains & Families for RPL21P43 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P43 Gene

Function for RPL21P43 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P43 Gene

Localization for RPL21P43 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P43 Gene

Pathways & Interactions for RPL21P43 Gene

SuperPathways for RPL21P43 Gene

No Data Available

Interacting Proteins for RPL21P43 Gene

Gene Ontology (GO) - Biological Process for RPL21P43 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P43 Gene

Drugs & Compounds for RPL21P43 Gene

No Compound Related Data Available

Transcripts for RPL21P43 Gene

mRNA/cDNA for RPL21P43 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P43 Gene

No ASD Table

Relevant External Links for RPL21P43 Gene

GeneLoc Exon Structure for
RPL21P43
ECgene alternative splicing isoforms for
RPL21P43

Expression for RPL21P43 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P43 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P43 Gene:

RPL21P43
genes like me logo Genes that share expression patterns with RPL21P43: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P43 Gene

Orthologs for RPL21P43 Gene

Evolution for RPL21P43 Gene

ENSEMBL:
Gene Tree for RPL21P43 (if available)
TreeFam:
Gene Tree for RPL21P43 (if available)

No data available for Orthologs for RPL21P43 Gene

Paralogs for RPL21P43 Gene

No data available for Paralogs for RPL21P43 Gene

Variants for RPL21P43 Gene

Relevant External Links for RPL21P43 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P43

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P43 Gene

Disorders for RPL21P43 Gene

Relevant External Links for RPL21P43

Genetic Association Database (GAD)
RPL21P43

No disorders were found for RPL21P43 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P43 Gene

Publications for RPL21P43 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. A genome-wide association study of aging. (PMID: 21782286) Walter S … Franceschini N (Neurobiology of aging 2011) 45 60
  3. Genome-wide association study of electrocardiographic and heart rate variability traits: the Framingham Heart Study. (PMID: 17903306) Newton-Cheh C … Larson MG (BMC medical genetics 2007) 45 60

Products for RPL21P43 Gene

Sources for RPL21P43 Gene

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