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Aliases for RPL21P42 Gene

Aliases for RPL21P42 Gene

  • Ribosomal Protein L21 Pseudogene 42 2 3 5
  • RPL21_13_421 3

External Ids for RPL21P42 Gene

Previous GeneCards Identifiers for RPL21P42 Gene

  • GC03U901226
  • GC03P153742

Summaries for RPL21P42 Gene

GeneCards Summary for RPL21P42 Gene

RPL21P42 (Ribosomal Protein L21 Pseudogene 42) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P42 Gene

Genomics for RPL21P42 Gene

Regulatory Elements for RPL21P42 Gene

Enhancers for RPL21P42 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F154022 0.6 ENCODE 0.8 -1.2 -1166 0.8 SOX13 SOX5 FOXA3 CEBPA ARHGEF26-AS1 ARHGEF26 RPL21P42 ENSG00000201398
GH03F154023 0.6 ENCODE 0.8 -0.5 -450 0.2 SOX13 ELF3 TFAP4 ZNF384 YY1 HOMEZ MIXL1 THAP11 GATAD2A SOX5 ARHGEF26-AS1 RPL21P42 ENSG00000201398
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL21P42 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P42 Gene

154,023,796 bp from pter
154,024,337 bp from pter
542 bases
Plus strand

Genomic View for RPL21P42 Gene

Genes around RPL21P42 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P42 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P42 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P42 Gene

Proteins for RPL21P42 Gene

Post-translational modifications for RPL21P42 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P42 Gene

Domains & Families for RPL21P42 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P42 Gene

Function for RPL21P42 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P42 Gene

Localization for RPL21P42 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P42 Gene

Pathways & Interactions for RPL21P42 Gene

SuperPathways for RPL21P42 Gene

No Data Available

Interacting Proteins for RPL21P42 Gene

Gene Ontology (GO) - Biological Process for RPL21P42 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL21P42 Gene

Transcripts for RPL21P42 Gene

mRNA/cDNA for RPL21P42 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P42 Gene

No ASD Table

Relevant External Links for RPL21P42 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL21P42 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P42 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P42 Gene

This gene is overexpressed in Brain - Amygdala (x5.2), Nerve - Tibial (x4.8), and Brain - Anterior cingulate cortex (BA24) (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of RPL21P42 Gene:

genes like me logo Genes that share expression patterns with RPL21P42: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P42 Gene

Orthologs for RPL21P42 Gene

Evolution for RPL21P42 Gene

Gene Tree for RPL21P42 (if available)
Gene Tree for RPL21P42 (if available)

No data available for Orthologs for RPL21P42 Gene

Paralogs for RPL21P42 Gene

No data available for Paralogs for RPL21P42 Gene

Variants for RPL21P42 Gene

Relevant External Links for RPL21P42 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P42 Gene

Disorders for RPL21P42 Gene

Relevant External Links for RPL21P42

Genetic Association Database (GAD)

No disorders were found for RPL21P42 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P42 Gene

Publications for RPL21P42 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 46 64
  3. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs J.B. … Dupuis J. (BMC Med. Genet. 2007) 46 64
  4. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 46 64
  5. Genome-wide association study for subclinical atherosclerosis in major arterial territories in the NHLBI's Framingham Heart Study. (PMID: 17903303) O'Donnell C.J. … Demissie S. (BMC Med. Genet. 2007) 46 64

Products for RPL21P42 Gene

Sources for RPL21P42 Gene

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