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Aliases for RPL21P31 Gene

Subcategory (RNA class) for RPL21P31 Gene

lncRNA

Aliases for RPL21P31 Gene

  • Ribosomal Protein L21 Pseudogene 31 2 3
  • RPL21_12_296 3
  • RP11-6C10.1 5

External Ids for RPL21P31 Gene

ORGUL Members for RPL21P31 Gene

Previous GeneCards Identifiers for RPL21P31 Gene

  • GC02U901676
  • GC02M175899

Summaries for RPL21P31 Gene

GeneCards Summary for RPL21P31 Gene

RPL21P31 (Ribosomal Protein L21 Pseudogene 31) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P31 Gene

Genomics for RPL21P31 Gene

Regulatory Elements for RPL21P31 Gene

Enhancers for RPL21P31 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F175036 0.8 Ensembl 0.8 -2.3 -2268 1.0 DMAP1 RAD21 RARA MIXL1 THAP11 ZNF654 PPARG NR2F2 KAT8 CREB3 CHN1 ATF2 ENSG00000229750 MIR933 WIPF1 RPL21P31 GC02M175073
GH02F175061 0.4 ENCODE 0.3 -28.7 -28708 2.1 ATF1 MLX ZFP64 ARID4B DMAP1 ZNF48 SLC30A9 SP5 NFYC ZHX2 ATP5G3 CHRNA1 CHN1 ENSG00000229750 MIR933 ATF2 GC02M175073 RPL21P31
GH02F175057 0.5 ENCODE 0.3 -23.1 -23054 0.2 SSRP1 ATF3 TCF7 TCF7L2 CHN1 RNU6-763P ATF2 ENSG00000229750 MIR933 GC02M175073 RPL21P31
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL21P31 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P31 Gene

Chromosome:
2
Start:
175,033,778 bp from pter
End:
175,034,234 bp from pter
Size:
457 bases
Orientation:
Minus strand

Genomic View for RPL21P31 Gene

Genes around RPL21P31 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P31 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P31 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P31 Gene

Proteins for RPL21P31 Gene

Post-translational modifications for RPL21P31 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P31 Gene

Domains & Families for RPL21P31 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P31 Gene

Function for RPL21P31 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P31 Gene

Localization for RPL21P31 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P31 Gene

Pathways & Interactions for RPL21P31 Gene

SuperPathways for RPL21P31 Gene

No Data Available

Interacting Proteins for RPL21P31 Gene

Gene Ontology (GO) - Biological Process for RPL21P31 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P31 Gene

Transcripts for RPL21P31 Gene

mRNA/cDNA for RPL21P31 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P31 Gene

No ASD Table

Relevant External Links for RPL21P31 Gene

GeneLoc Exon Structure for
RPL21P31
ECgene alternative splicing isoforms for
RPL21P31

Expression for RPL21P31 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P31 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P31 Gene:

RPL21P31
genes like me logo Genes that share expression patterns with RPL21P31: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P31 Gene

Orthologs for RPL21P31 Gene

Evolution for RPL21P31 Gene

ENSEMBL:
Gene Tree for RPL21P31 (if available)
TreeFam:
Gene Tree for RPL21P31 (if available)

No data available for Orthologs for RPL21P31 Gene

Paralogs for RPL21P31 Gene

No data available for Paralogs for RPL21P31 Gene

Variants for RPL21P31 Gene

Relevant External Links for RPL21P31 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P31

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P31 Gene

Disorders for RPL21P31 Gene

No disorders were found for RPL21P31 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P31 Gene

Publications for RPL21P31 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL21P31 Gene

Sources for RPL21P31 Gene

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