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Aliases for RPL21P29 Gene

Aliases for RPL21P29 Gene

  • Ribosomal Protein L21 Pseudogene 29 2 3
  • RPL21_1_19 3
  • AL590556.1 5

External Ids for RPL21P29 Gene

Previous GeneCards Identifiers for RPL21P29 Gene

  • GC01P022110
  • GC01P022236

Summaries for RPL21P29 Gene

GeneCards Summary for RPL21P29 Gene

RPL21P29 (Ribosomal Protein L21 Pseudogene 29) is a Pseudogene.

Additional gene information for RPL21P29 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P29 Gene

Genomics for RPL21P29 Gene

GeneHancer (GH) Regulatory Elements for RPL21P29 Gene

Promoters and enhancers for RPL21P29 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I021893 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.8 -2.8 -2764 22.6 HDGF HNRNPUL1 PKNOX1 SMAD1 MLX ARNT ZFP64 POLR2B ZNF766 CBX5 ZBTB40 HSPG2 LDLRAD2 CDC42-IT1 USP48 EPHB2 RPL21P29 GC01M021883
GH01I021918 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +21.7 21690 22.2 HDGF PKNOX1 CLOCK FOXA2 SMAD1 ARNT ZFP64 ARID4B SIN3A DMAP1 HSPG2 GC01P021930 USP48 CELA3B GC01M021926 RPL21P29
GH01I021916 Enhancer 1.2 ENCODE dbSUPER 0.4 +9.1 9113 0.9 PKNOX1 ATF1 ARNT ZFP64 TCF12 ZNF766 ZNF213 GATA2 ATF7 NCOA1 ZBTB40 USP48 CDC42-IT1 NBPF3 ENSG00000271428 NBPF2P RPL21P29 GC01P021930 HSPG2
GH01I021884 Enhancer 0.7 dbSUPER 0.3 -21.8 -21796 3.1 CTCF HDAC1 YBX3 HDGF DPF2 E4F1 EP300 ZNF592 ZKSCAN1 HDAC2 GC01M021883 HSPG2 LDLRAD2 USP48 LINC00339 RPL21P29
GH01I021890 Enhancer 0.5 dbSUPER 0.4 -16.5 -16496 2.6 ZNF121 PKNOX1 ZBTB33 FOS GC01M021883 RPL21P29 HSPG2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL21P29 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P29 Gene

Genomic Locations for RPL21P29 Gene
chr1:21,908,058-21,908,614
(GRCh38/hg38)
Size:
557 bases
Orientation:
Plus strand
chr1:22,234,551-22,235,107
(GRCh37/hg19)

Genomic View for RPL21P29 Gene

Genes around RPL21P29 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P29 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P29 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P29 Gene

Proteins for RPL21P29 Gene

Post-translational modifications for RPL21P29 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P29 Gene

Domains & Families for RPL21P29 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P29 Gene

Function for RPL21P29 Gene

Phenotypes From GWAS Catalog for RPL21P29 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P29 Gene

Localization for RPL21P29 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P29 Gene

Pathways & Interactions for RPL21P29 Gene

SuperPathways for RPL21P29 Gene

No Data Available

Interacting Proteins for RPL21P29 Gene

Gene Ontology (GO) - Biological Process for RPL21P29 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P29 Gene

Drugs & Compounds for RPL21P29 Gene

No Compound Related Data Available

Transcripts for RPL21P29 Gene

mRNA/cDNA for RPL21P29 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P29 Gene

No ASD Table

Relevant External Links for RPL21P29 Gene

GeneLoc Exon Structure for
RPL21P29
ECgene alternative splicing isoforms for
RPL21P29

Expression for RPL21P29 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P29 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P29 Gene:

RPL21P29
genes like me logo Genes that share expression patterns with RPL21P29: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P29 Gene

Orthologs for RPL21P29 Gene

Evolution for RPL21P29 Gene

ENSEMBL:
Gene Tree for RPL21P29 (if available)
TreeFam:
Gene Tree for RPL21P29 (if available)

No data available for Orthologs for RPL21P29 Gene

Paralogs for RPL21P29 Gene

No data available for Paralogs for RPL21P29 Gene

Variants for RPL21P29 Gene

Additional Variant Information for RPL21P29 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P29

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P29 Gene

Disorders for RPL21P29 Gene

No disorders were found for RPL21P29 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P29 Gene

Publications for RPL21P29 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL21P29 Gene

Sources for RPL21P29 Gene

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