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Aliases for RPL21P28 Gene

Aliases for RPL21P28 Gene

  • Ribosomal Protein L21 Pseudogene 28 2 3 5
  • RPL21_8_160 3

External Ids for RPL21P28 Gene

Previous GeneCards Identifiers for RPL21P28 Gene

  • GC01M210294
  • GC01M212225
  • GC01M182901

Summaries for RPL21P28 Gene

GeneCards Summary for RPL21P28 Gene

RPL21P28 (Ribosomal Protein L21 Pseudogene 28) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P28 Gene

Genomics for RPL21P28 Gene

Regulatory Elements for RPL21P28 Gene

Enhancers for RPL21P28 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F212789 1.2 ENCODE 20.3 -739.5 -739546 4.4 CREB3L1 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 FLVCR1 FLVCR1-AS1 TATDN3 RPL21P28 LOC105372907 ENSG00000225233 LOC105372912 ANGEL2 ENSG00000235182 RPS28P2
GH01F212241 1.4 Ensembl ENCODE 10.8 -190.4 -190360 2.0 HDGF PKNOX1 ARNT MLX CREB3L1 ZFP64 ARID4B SIN3A DMAP1 YY1 LOC101929541 RCOR3 RPL21P28 ENSG00000212187 NEK2 ENSG00000229832 TMEM206 GC01P212241
GH01F212029 1.3 Ensembl ENCODE 11.5 +20.8 20783 2.7 ATF1 FOS JUNB PPARG ZNF518A KAT8 CREB3 ATF4 SMARCA4 RCOR2 RPL21P28 NEK2 LOC91548 INTS7 DTL ENSG00000212187
GH01F212151 1.3 Ensembl ENCODE 11.4 -100.9 -100892 2.1 HDGF ATF1 PKNOX1 ARNT CBX5 ELK1 GATA2 KLF13 NCOA1 REST RCOR3 RPL21P28 GC01P212144 ENSG00000229983
GH01F212033 1.2 ENCODE 11.6 +15.8 15823 4.6 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 RCOR3 RPL21P28 NEK2 LOC91548 INTS7 LPGAT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P28 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P28 Gene

212,051,486 bp from pter
212,052,051 bp from pter
566 bases
Minus strand

Genomic View for RPL21P28 Gene

Genes around RPL21P28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P28 Gene

Proteins for RPL21P28 Gene

Post-translational modifications for RPL21P28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P28 Gene

Domains & Families for RPL21P28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P28 Gene

Function for RPL21P28 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P28 Gene

Localization for RPL21P28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P28 Gene

Pathways & Interactions for RPL21P28 Gene

SuperPathways for RPL21P28 Gene

No Data Available

Interacting Proteins for RPL21P28 Gene

Gene Ontology (GO) - Biological Process for RPL21P28 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL21P28 Gene

Transcripts for RPL21P28 Gene

mRNA/cDNA for RPL21P28 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPL21P28 Gene

Ribosomal protein L21 pseudogene 28:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P28 Gene

No ASD Table

Relevant External Links for RPL21P28 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL21P28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P28 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P28 Gene:


SOURCE GeneReport for Unigene cluster for RPL21P28 Gene:

genes like me logo Genes that share expression patterns with RPL21P28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P28 Gene

Orthologs for RPL21P28 Gene

Evolution for RPL21P28 Gene

Gene Tree for RPL21P28 (if available)
Gene Tree for RPL21P28 (if available)

No data available for Orthologs for RPL21P28 Gene

Paralogs for RPL21P28 Gene

No data available for Paralogs for RPL21P28 Gene

Variants for RPL21P28 Gene

Sequence variations from dbSNP and Humsavar for RPL21P28 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1062417 -- 212,051,497(-) AAAGG(A/C)CCTCT intron-variant, nc-transcript-variant
rs113106720 -- 212,051,604(+) TCTGG(G/T)TGGAG intron-variant, nc-transcript-variant
rs114282711 -- 212,051,355(+) TGATG(A/G)TAATA intron-variant, downstream-variant-500B
rs11547408 -- 212,051,915(-) ATATA(C/T)GCGAA intron-variant, nc-transcript-variant
rs115898070 -- 212,051,329(+) ATTTA(A/C)CTTTT intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for RPL21P28 Gene

Variant ID Type Subtype PubMed ID
nsv945281 CNV duplication 23825009
nsv506979 OTHER sequence alteration 20534489
nsv4432 CNV insertion 18451855

Relevant External Links for RPL21P28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPL21P28 Gene

Disorders for RPL21P28 Gene

Relevant External Links for RPL21P28

Genetic Association Database (GAD)
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for RPL21P28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P28 Gene

Publications for RPL21P28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Chromosome 6p22 locus associated with clinically aggressive neuroblastoma. (PMID: 18463370) Maris J.M. … Hakonarson H. (N. Engl. J. Med. 2008) 46 64
  3. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 46 64
  4. Genome-wide association of sleep and circadian phenotypes. (PMID: 17903308) Gottlieb D.J. … Wilk J.B. (BMC Med. Genet. 2007) 46 64

Products for RPL21P28 Gene

Sources for RPL21P28 Gene

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