Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL21P25 Gene

Subcategory (RNA class) for RPL21P25 Gene


Aliases for RPL21P25 Gene

  • Ribosomal Protein L21 Pseudogene 25 2 3
  • RPL21_5_46 3
  • AL356968.1 5

External Ids for RPL21P25 Gene

ORGUL Members for RPL21P25 Gene

Previous GeneCards Identifiers for RPL21P25 Gene

  • GC01U902341
  • GC01M048963

Summaries for RPL21P25 Gene

GeneCards Summary for RPL21P25 Gene

RPL21P25 (Ribosomal Protein L21 Pseudogene 25) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL21P25 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P25 Gene

Genomics for RPL21P25 Gene

Regulatory Elements for RPL21P25 Gene

Enhancers for RPL21P25 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H048493 1.1 Ensembl ENCODE 0.7 +3.4 3359 2.6 TBP TFAP4 FEZF1 ZIC2 ZNF644 TEAD3 ZSCAN5C FOS PRDM10 NR2F6 ENSG00000272491 SLC5A9 SKINT1L RPL21P25 SPATA6
GH01H048498 0.9 Ensembl ENCODE 0.7 -0.9 -929 0.3 CTCF L3MBTL2 MBD1 TRIM22 MAX MNT RAD21 TRIM28 ENSG00000272491 RPL21P25 GC01P048499
GH01H048499 0.7 ENCODE 0.7 -0.5 -548 0.2 CTCF ZNF654 TRIM22 REST RAD21 TEAD3 GATA3 KLF16 ZNF143 SMC3 RPL21P25 GC01P048499
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P25 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P25 Gene

Genomic Locations for RPL21P25 Gene
480 bases
Minus strand

Genomic View for RPL21P25 Gene

Genes around RPL21P25 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P25 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P25 Gene

Proteins for RPL21P25 Gene

Post-translational modifications for RPL21P25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P25 Gene

Domains & Families for RPL21P25 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P25 Gene

Function for RPL21P25 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P25 Gene

Localization for RPL21P25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P25 Gene

Pathways & Interactions for RPL21P25 Gene

SuperPathways for RPL21P25 Gene

No Data Available

Interacting Proteins for RPL21P25 Gene

Gene Ontology (GO) - Biological Process for RPL21P25 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL21P25 Gene

Drugs & Compounds for RPL21P25 Gene

No Compound Related Data Available

Transcripts for RPL21P25 Gene

mRNA/cDNA for RPL21P25 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P25 Gene

No ASD Table

Relevant External Links for RPL21P25 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL21P25 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P25 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P25 Gene

This gene is overexpressed in Pituitary (x19.6), Brain - Cortex (x6.5), and Brain - Putamen (basal ganglia) (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of RPL21P25 Gene:

genes like me logo Genes that share expression patterns with RPL21P25: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P25 Gene

Orthologs for RPL21P25 Gene

Evolution for RPL21P25 Gene

Gene Tree for RPL21P25 (if available)
Gene Tree for RPL21P25 (if available)

No data available for Orthologs for RPL21P25 Gene

Paralogs for RPL21P25 Gene

No data available for Paralogs for RPL21P25 Gene

Variants for RPL21P25 Gene

Relevant External Links for RPL21P25 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P25 Gene

Disorders for RPL21P25 Gene

Relevant External Links for RPL21P25

Genetic Association Database (GAD)

No disorders were found for RPL21P25 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P25 Gene

Publications for RPL21P25 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 45 60

Products for RPL21P25 Gene

Sources for RPL21P25 Gene

Loading form....