Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL21P21 Gene

Subcategory (RNA class) for RPL21P21 Gene

antisense

Aliases for RPL21P21 Gene

  • Ribosomal Protein L21 Pseudogene 21 2 3
  • RP11-496H15.2 5
  • RPL21_1_11 3

External Ids for RPL21P21 Gene

ORGUL Members for RPL21P21 Gene

Previous GeneCards Identifiers for RPL21P21 Gene

  • GC01U902340
  • GC01M010115

Summaries for RPL21P21 Gene

GeneCards Summary for RPL21P21 Gene

RPL21P21 (Ribosomal Protein L21 Pseudogene 21) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P21 Gene

Genomics for RPL21P21 Gene

Regulatory Elements for RPL21P21 Gene

Enhancers for RPL21P21 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G010045 1.4 Ensembl ENCODE dbSUPER 0.4 +8.3 8281 1.8 HDAC1 HDGF YY1 TCF12 GATA2 USF2 ZNF592 MEF2D TFDP1 CREB3 NMNAT1 RPL21P21 UBE4B
GH01G010031 1.4 ENCODE dbSUPER 0.3 +21.4 21418 4.2 HDGF PKNOX1 FOXA2 CREB3L1 ARNT AGO1 ARID4B SIN3A DMAP1 ZNF2 LZIC KIF1B RBP7 PGD UBE4B RPL21P21
GH01G010050 0.5 dbSUPER 0.7 +3.3 3323 2.8 ZNF121 CTCF ZNF133 KAT2B RPL21P21 UBE4B
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P21 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P21 Gene

Chromosome:
1
Start:
10,054,440 bp from pter
End:
10,054,782 bp from pter
Size:
343 bases
Orientation:
Minus strand

Genomic View for RPL21P21 Gene

Genes around RPL21P21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P21 Gene

Proteins for RPL21P21 Gene

Post-translational modifications for RPL21P21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P21 Gene

Domains & Families for RPL21P21 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P21 Gene

Function for RPL21P21 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P21 Gene

Localization for RPL21P21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P21 Gene

Pathways & Interactions for RPL21P21 Gene

SuperPathways for RPL21P21 Gene

No Data Available

Interacting Proteins for RPL21P21 Gene

Gene Ontology (GO) - Biological Process for RPL21P21 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P21 Gene

Drugs & Compounds for RPL21P21 Gene

No Compound Related Data Available

Transcripts for RPL21P21 Gene

mRNA/cDNA for RPL21P21 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P21 Gene

No ASD Table

Relevant External Links for RPL21P21 Gene

GeneLoc Exon Structure for
RPL21P21
ECgene alternative splicing isoforms for
RPL21P21

Expression for RPL21P21 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P21 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P21 Gene:

RPL21P21
genes like me logo Genes that share expression patterns with RPL21P21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P21 Gene

Orthologs for RPL21P21 Gene

Evolution for RPL21P21 Gene

ENSEMBL:
Gene Tree for RPL21P21 (if available)
TreeFam:
Gene Tree for RPL21P21 (if available)

No data available for Orthologs for RPL21P21 Gene

Paralogs for RPL21P21 Gene

No data available for Paralogs for RPL21P21 Gene

Variants for RPL21P21 Gene

Relevant External Links for RPL21P21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P21 Gene

Disorders for RPL21P21 Gene

No disorders were found for RPL21P21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P21 Gene

Publications for RPL21P21 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL21P21 Gene

Sources for RPL21P21 Gene

Content
Loading form....