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Aliases for RPL21P20 Gene

Aliases for RPL21P20 Gene

  • Ribosomal Protein L21 Pseudogene 20 2 3
  • RP1-228H13.1 5
  • RPL21_3_36 3

External Ids for RPL21P20 Gene

Previous GeneCards Identifiers for RPL21P20 Gene

  • GC01M040573
  • GC01M040799

Summaries for RPL21P20 Gene

GeneCards Summary for RPL21P20 Gene

RPL21P20 (Ribosomal Protein L21 Pseudogene 20) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P20 Gene

Genomics for RPL21P20 Gene

Regulatory Elements for RPL21P20 Gene

Enhancers for RPL21P20 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F040338 1.6 FANTOM5 Ensembl ENCODE 0.4 -6.0 -6003 2.0 HDGF PKNOX1 MLX WRNIP1 SIN3A ARID4B ZNF48 ZNF2 SLC30A9 ZNF143 COL9A2 ENSG00000231296 ZMPSTE24 TMCO2 EXO5 SMAP2 PPT1 RLF RPL21P20
GH01F040341 1.4 FANTOM5 Ensembl ENCODE 0.4 -8.7 -8703 1.8 ATF1 CBX3 BACH1 RAD21 FOSL1 IRF9 ZFHX2 NR2F6 EGR2 ZNF639 SMAP2 MFSD2A RLF RPL21P20
GH01F040344 0.8 ENCODE 0.4 -11.1 -11141 1.1 CTCF PKNOX1 BMI1 ZBTB40 RAD21 ZNF316 GATA2 ZNF366 POLR2A NFE2 SMAP2 RPL21P20
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P20 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P20 Gene

Chromosome:
1
Start:
40,333,042 bp from pter
End:
40,333,598 bp from pter
Size:
557 bases
Orientation:
Minus strand

Genomic View for RPL21P20 Gene

Genes around RPL21P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P20 Gene

Proteins for RPL21P20 Gene

Post-translational modifications for RPL21P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P20 Gene

Domains & Families for RPL21P20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P20 Gene

Function for RPL21P20 Gene

Phenotypes for RPL21P20 Gene

GenomeRNAi human phenotypes for RPL21P20:
genes like me logo Genes that share phenotypes with RPL21P20: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P20 Gene

Localization for RPL21P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P20 Gene

Pathways & Interactions for RPL21P20 Gene

SuperPathways for RPL21P20 Gene

No Data Available

Interacting Proteins for RPL21P20 Gene

Gene Ontology (GO) - Biological Process for RPL21P20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P20 Gene

Transcripts for RPL21P20 Gene

mRNA/cDNA for RPL21P20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P20 Gene

No ASD Table

Relevant External Links for RPL21P20 Gene

GeneLoc Exon Structure for
RPL21P20
ECgene alternative splicing isoforms for
RPL21P20

Expression for RPL21P20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P20 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P20 Gene:

RPL21P20
genes like me logo Genes that share expression patterns with RPL21P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P20 Gene

Orthologs for RPL21P20 Gene

Evolution for RPL21P20 Gene

ENSEMBL:
Gene Tree for RPL21P20 (if available)
TreeFam:
Gene Tree for RPL21P20 (if available)

No data available for Orthologs for RPL21P20 Gene

Paralogs for RPL21P20 Gene

No data available for Paralogs for RPL21P20 Gene

Variants for RPL21P20 Gene

Relevant External Links for RPL21P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P20 Gene

Disorders for RPL21P20 Gene

No disorders were found for RPL21P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P20 Gene

Publications for RPL21P20 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL21P20 Gene

Sources for RPL21P20 Gene

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