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Aliases for RPL21P2 Gene

Aliases for RPL21P2 Gene

  • Ribosomal Protein L21 Pseudogene 2 2 3 5
  • RPL21_65_1679 3
  • BA352D3.1 3

External Ids for RPL21P2 Gene

Previous GeneCards Identifiers for RPL21P2 Gene

  • GC20U990126
  • GC20M003988

Summaries for RPL21P2 Gene

GeneCards Summary for RPL21P2 Gene

RPL21P2 (Ribosomal Protein L21 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P2 Gene

Genomics for RPL21P2 Gene

Regulatory Elements for RPL21P2 Gene

Enhancers for RPL21P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20G004081 2 FANTOM5 Ensembl ENCODE dbSUPER 13.3 -23.7 -23714 5.0 HDGF PKNOX1 MLX ARNT ZFP64 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 RPL21P2 PANK2 SMOX ENSG00000229539 CENPB CDC25B SPEF1 RNF24 ENSG00000205300
GH20G004089 1.8 FANTOM5 Ensembl ENCODE dbSUPER 13.2 -30.9 -30852 2.5 PKNOX1 CBX3 NFRKB ARID4B DNMT3B RAD21 YY1 TCF12 GATA2 ZNF143 RPL21P2 CDC25B CENPB RNF24 PANK2 ENSG00000205300 SMOX
GH20G004025 1.4 Ensembl ENCODE dbSUPER 13 +33.5 33547 2.9 HDAC1 HDGF PKNOX1 CBX3 RAD21 ZNF335 TCF12 ZNF121 CBX5 EGR1 RPL21P2 ENSG00000205300 FTLP3
GH20G004021 1.1 Ensembl ENCODE dbSUPER 12.5 +37.6 37609 1.9 HLF CEBPB ZMYM3 REST ZNF121 SMARCA4 POLR2A IKZF1 ZBTB33 MLLT1 ENSG00000229539 PANK2 RPL21P2 ENSG00000205300 AP5S1 SPEF1 FTLP3 RNF24
GH20G004016 1.1 Ensembl ENCODE 11.9 +42.3 42327 2.5 HDGF PKNOX1 FOXA2 FOS CEBPB ZNF592 MAFF RAD51 SMARCA4 CEBPA ENSG00000229539 RPL21P2 ENSG00000205300 PANK2 AP5S1 RNF24 FTLP3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P2 Gene

Chromosome:
20
Start:
4,059,601 bp from pter
End:
4,060,152 bp from pter
Size:
552 bases
Orientation:
Minus strand

Genomic View for RPL21P2 Gene

Genes around RPL21P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P2 Gene

Proteins for RPL21P2 Gene

Post-translational modifications for RPL21P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P2 Gene

Domains & Families for RPL21P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P2 Gene

Function for RPL21P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P2 Gene

Localization for RPL21P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P2 Gene

Pathways & Interactions for RPL21P2 Gene

SuperPathways for RPL21P2 Gene

No Data Available

Interacting Proteins for RPL21P2 Gene

Gene Ontology (GO) - Biological Process for RPL21P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P2 Gene

Drugs & Compounds for RPL21P2 Gene

No Compound Related Data Available

Transcripts for RPL21P2 Gene

mRNA/cDNA for RPL21P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P2 Gene

No ASD Table

Relevant External Links for RPL21P2 Gene

GeneLoc Exon Structure for
RPL21P2
ECgene alternative splicing isoforms for
RPL21P2

Expression for RPL21P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P2 Gene:

RPL21P2
genes like me logo Genes that share expression patterns with RPL21P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P2 Gene

Orthologs for RPL21P2 Gene

Evolution for RPL21P2 Gene

ENSEMBL:
Gene Tree for RPL21P2 (if available)
TreeFam:
Gene Tree for RPL21P2 (if available)

No data available for Orthologs for RPL21P2 Gene

Paralogs for RPL21P2 Gene

No data available for Paralogs for RPL21P2 Gene

Variants for RPL21P2 Gene

Relevant External Links for RPL21P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P2 Gene

Disorders for RPL21P2 Gene

Relevant External Links for RPL21P2

Genetic Association Database (GAD)
RPL21P2

No disorders were found for RPL21P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P2 Gene

Publications for RPL21P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Hundreds of variants clustered in genomic loci and biological pathways affect human height. (PMID: 20881960) Lango Allen H. … Hirschhorn J.N. (Nature 2010) 46 64

Products for RPL21P2 Gene

Sources for RPL21P2 Gene

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