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Aliases for RPL21P16 Gene

Aliases for RPL21P16 Gene

  • Ribosomal Protein L21 Pseudogene 16 2 3 5
  • RPL21_38_1104 3

External Ids for RPL21P16 Gene

Previous GeneCards Identifiers for RPL21P16 Gene

  • GC10U900530
  • GC10M122107
  • GC10M122108

Summaries for RPL21P16 Gene

GeneCards Summary for RPL21P16 Gene

RPL21P16 (Ribosomal Protein L21 Pseudogene 16) is a Pseudogene.

Additional gene information for RPL21P16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P16 Gene

Genomics for RPL21P16 Gene

GeneHancer (GH) Regulatory Elements for RPL21P16 Gene

Promoters and enhancers for RPL21P16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I119783 Enhancer 1.5 FANTOM5 Ensembl ENCODE 12.1 +569.7 569744 4.2 ATF1 FOXA2 ARID4B SIN3A FEZF1 DMAP1 GTF3C2 ZNF121 ATF7 RUNX3 INPP5F RPL17P36 SEC23IP TIAL1 RPL21P16 TXNP1 RN7SL846P GC10P119759 GC10M119816
GH10I119686 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.5 +667.3 667309 3.8 HDGF PKNOX1 FOXA2 ARID4B NEUROD1 SIN3A FEZF1 ZNF2 IRF4 YY1 BAG3 TIAL1 SEC23IP RPL17P36 RPL21P16 TXNP1 INPP5F
GH10I121332 Enhancer 0.6 ENCODE 11 -978.0 -978032 1.8 SMARCE1 ZNF449 ZNF529 GATAD2B DPF2 ZNF670 ZNF514 CTBP1 GATA3 ZNF747 WDR11 NSMCE4A RPL21P16 ATE1-AS1 LOC105378523 GC10M121343
GH10I120394 Enhancer 0.3 ENCODE 0.3 -39.5 -39492 0.7 JUN GC10P120405 GC10M120361 RPL21P16
GH10I120387 Enhancer 0.3 ENCODE 0.3 -32.3 -32278 0.2 JUND GC10P120405 GC10M120361 RPL21P16
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL21P16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P16 Gene

Genomic Locations for RPL21P16 Gene
chr10:120,354,645-120,355,226
(GRCh38/hg38)
Size:
582 bases
Orientation:
Minus strand
chr10:122,114,157-122,114,738
(GRCh37/hg19)

Genomic View for RPL21P16 Gene

Genes around RPL21P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P16 Gene

Proteins for RPL21P16 Gene

Post-translational modifications for RPL21P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P16 Gene

Domains & Families for RPL21P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P16 Gene

Function for RPL21P16 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P16 Gene

Localization for RPL21P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P16 Gene

Pathways & Interactions for RPL21P16 Gene

SuperPathways for RPL21P16 Gene

No Data Available

Interacting Proteins for RPL21P16 Gene

Gene Ontology (GO) - Biological Process for RPL21P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P16 Gene

Drugs & Compounds for RPL21P16 Gene

No Compound Related Data Available

Transcripts for RPL21P16 Gene

mRNA/cDNA for RPL21P16 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P16 Gene

No ASD Table

Relevant External Links for RPL21P16 Gene

GeneLoc Exon Structure for
RPL21P16
ECgene alternative splicing isoforms for
RPL21P16

Expression for RPL21P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P16 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P16 Gene:

RPL21P16
genes like me logo Genes that share expression patterns with RPL21P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P16 Gene

Orthologs for RPL21P16 Gene

Evolution for RPL21P16 Gene

ENSEMBL:
Gene Tree for RPL21P16 (if available)
TreeFam:
Gene Tree for RPL21P16 (if available)

No data available for Orthologs for RPL21P16 Gene

Paralogs for RPL21P16 Gene

No data available for Paralogs for RPL21P16 Gene

Variants for RPL21P16 Gene

Additional Variant Information for RPL21P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P16 Gene

Disorders for RPL21P16 Gene

No disorders were found for RPL21P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P16 Gene

Publications for RPL21P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics. (PMID: 21145461) Bennett EJ … Harper JW (Cell 2010) 3 58

Products for RPL21P16 Gene

Sources for RPL21P16 Gene

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