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Aliases for RPL21P16 Gene

Aliases for RPL21P16 Gene

  • Ribosomal Protein L21 Pseudogene 16 2 3 5
  • RPL21_38_1104 3

External Ids for RPL21P16 Gene

Previous GeneCards Identifiers for RPL21P16 Gene

  • GC10U900530
  • GC10M122107
  • GC10M122108

Summaries for RPL21P16 Gene

GeneCards Summary for RPL21P16 Gene

RPL21P16 (Ribosomal Protein L21 Pseudogene 16) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P16 Gene

Genomics for RPL21P16 Gene

Regulatory Elements for RPL21P16 Gene

Enhancers for RPL21P16 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F119891 1.1 ENCODE 20.5 +462.7 462664 2.1 HDGF PKNOX1 CREB3L1 MLX WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 SEC23IP RPL21P16 INPP5F MCMBP
GH10F120850 1.1 ENCODE 20.5 -496.5 -496541 2.5 HDGF PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 WDR11 RPL21P16 SEC23IP WDR11-AS1 ENSG00000271670
GH10F119783 1.5 FANTOM5 Ensembl ENCODE 12.1 +569.6 569626 4.8 ATF1 ARID4B FEZF1 DMAP1 YY1 GTF3C2 ZNF121 ZNF202 SP5 JUNB SEC23IP RPL17P36 INPP5F RPL21P16 MCMBP TXNP1 RN7SL846P GC10M119816
GH10F119759 0.9 Ensembl ENCODE 11 +594.2 594168 2.5 TBP THRB RARA ZNF121 FOS CREM SP5 CEBPB KAT8 KLF16 INPP5F SEC23IP RPL17P36 MCMBP RPL21P16 PHACTR2P1 GC10P119759 RN7SL846P
GH10F121332 0.2 ENCODE 11 -978.0 -978032 1.8 REST ZNF670 ZNF514 CTBP1 GATA3 SMARCA4 ZNF747 ZNF280C EGR2 TCF7L2 RPL21P16 LOC105378523 GC10M121343
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL21P16 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P16 Gene

Chromosome:
10
Start:
120,354,645 bp from pter
End:
120,355,226 bp from pter
Size:
582 bases
Orientation:
Minus strand

Genomic View for RPL21P16 Gene

Genes around RPL21P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P16 Gene

Proteins for RPL21P16 Gene

Post-translational modifications for RPL21P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P16 Gene

Domains & Families for RPL21P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P16 Gene

Function for RPL21P16 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P16 Gene

Localization for RPL21P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P16 Gene

Pathways & Interactions for RPL21P16 Gene

SuperPathways for RPL21P16 Gene

No Data Available

Interacting Proteins for RPL21P16 Gene

Gene Ontology (GO) - Biological Process for RPL21P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P16 Gene

Transcripts for RPL21P16 Gene

mRNA/cDNA for RPL21P16 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P16 Gene

No ASD Table

Relevant External Links for RPL21P16 Gene

GeneLoc Exon Structure for
RPL21P16
ECgene alternative splicing isoforms for
RPL21P16

Expression for RPL21P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P16 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P16 Gene:

RPL21P16
genes like me logo Genes that share expression patterns with RPL21P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P16 Gene

Orthologs for RPL21P16 Gene

Evolution for RPL21P16 Gene

ENSEMBL:
Gene Tree for RPL21P16 (if available)
TreeFam:
Gene Tree for RPL21P16 (if available)

No data available for Orthologs for RPL21P16 Gene

Paralogs for RPL21P16 Gene

No data available for Paralogs for RPL21P16 Gene

Variants for RPL21P16 Gene

Relevant External Links for RPL21P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P16 Gene

Disorders for RPL21P16 Gene

No disorders were found for RPL21P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P16 Gene

Publications for RPL21P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics. (PMID: 21145461) Bennett E.J. … Harper J.W. (Cell 2010) 3 64

Products for RPL21P16 Gene

Sources for RPL21P16 Gene

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