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Aliases for RPL21P126 Gene

Aliases for RPL21P126 Gene

  • Ribosomal Protein L21 Pseudogene 126 2 3 5
  • RPL21_59_1605 3

External Ids for RPL21P126 Gene

Previous GeneCards Identifiers for RPL21P126 Gene

  • GC18U900487
  • GC18P053304

Summaries for RPL21P126 Gene

GeneCards Summary for RPL21P126 Gene

RPL21P126 (Ribosomal Protein L21 Pseudogene 126) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P126 Gene

Genomics for RPL21P126 Gene

Regulatory Elements for RPL21P126 Gene

Enhancers for RPL21P126 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18G055584 1.6 Ensembl ENCODE dbSUPER 11.8 -48.1 -48103 5.8 PKNOX1 CREB3L1 SIN3A ZNF2 YY1 ZNF766 ZNF143 KLF13 ZNF263 SP3 RPL21P126 TCF4 LINC01929 LINC01415 GC18P055590 GC18M055559
GH18G055731 1.2 Ensembl ENCODE 11.4 +96.6 96612 1.2 ATF1 CREB3L1 ARNT TCF12 GATA2 FOS NCOA1 JUNB REST CREB3 TCF4 RPL21P126 ENSG00000267284 LINC01415
GH18G055592 0.9 ENCODE 11.8 -42.9 -42930 0.2 HDAC1 PKNOX1 TBL1XR1 NFRKB TCF12 ELK1 GATA2 CEBPB NCOA1 ZNF592 RPL21P126 TCF4 LOC105372126
GH18G055581 0.8 ENCODE dbSUPER 11.7 -53.2 -53232 1.7 PRDM6 ZBTB48 TEAD4 PRDM10 CHD7 ZBTB40 PRDM1 RPL21P126 TCF4 GC18P055590 GC18M055559
GH18G055735 0.7 ENCODE 11.4 +99.6 99571 0.2 HDAC1 LEF1 PKNOX1 TBL1XR1 TAL1 TCF12 FOXK2 NCOR1 MTA2 RNF2 TCF4 RPL21P126 ENSG00000267284 LINC01415
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P126 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P126 Gene

Chromosome:
18
Start:
55,635,794 bp from pter
End:
55,636,346 bp from pter
Size:
553 bases
Orientation:
Plus strand

Genomic View for RPL21P126 Gene

Genes around RPL21P126 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P126 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P126 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P126 Gene

Proteins for RPL21P126 Gene

Post-translational modifications for RPL21P126 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P126 Gene

Domains & Families for RPL21P126 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P126 Gene

Function for RPL21P126 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P126 Gene

Localization for RPL21P126 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P126 Gene

Pathways & Interactions for RPL21P126 Gene

SuperPathways for RPL21P126 Gene

No Data Available

Interacting Proteins for RPL21P126 Gene

Gene Ontology (GO) - Biological Process for RPL21P126 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P126 Gene

Drugs & Compounds for RPL21P126 Gene

No Compound Related Data Available

Transcripts for RPL21P126 Gene

mRNA/cDNA for RPL21P126 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P126 Gene

No ASD Table

Relevant External Links for RPL21P126 Gene

GeneLoc Exon Structure for
RPL21P126
ECgene alternative splicing isoforms for
RPL21P126

Expression for RPL21P126 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P126 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P126 Gene

This gene is overexpressed in Testis (x49.4).

NURSA nuclear receptor signaling pathways regulating expression of RPL21P126 Gene:

RPL21P126
genes like me logo Genes that share expression patterns with RPL21P126: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P126 Gene

Orthologs for RPL21P126 Gene

Evolution for RPL21P126 Gene

ENSEMBL:
Gene Tree for RPL21P126 (if available)
TreeFam:
Gene Tree for RPL21P126 (if available)

No data available for Orthologs for RPL21P126 Gene

Paralogs for RPL21P126 Gene

No data available for Paralogs for RPL21P126 Gene

Variants for RPL21P126 Gene

Relevant External Links for RPL21P126 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P126

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P126 Gene

Disorders for RPL21P126 Gene

Relevant External Links for RPL21P126

Genetic Association Database (GAD)
RPL21P126

No disorders were found for RPL21P126 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P126 Gene

Publications for RPL21P126 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Common human genetic variants and HIV-1 susceptibility: a genome-wide survey in a homogeneous African population. (PMID: 21160409) Petrovski S. … Goldstein D.B. (AIDS 2011) 46 64
  3. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q. … O'Donnell C.J. (BMC Med. Genet. 2007) 46 64
  4. A second-generation genomewide screen for asthma-susceptibility alleles in a founder population. (PMID: 11022011) Ober C. … Cox N.J. (Am. J. Hum. Genet. 2000) 46 64

Products for RPL21P126 Gene

Sources for RPL21P126 Gene

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