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Aliases for RPL21P123 Gene

Subcategory (RNA class) for RPL21P123 Gene

lncRNA

Aliases for RPL21P123 Gene

  • Ribosomal Protein L21 Pseudogene 123 2 3 5
  • RPL21_59_1535 3

External Ids for RPL21P123 Gene

ORGUL Members for RPL21P123 Gene

Previous GeneCards Identifiers for RPL21P123 Gene

  • GC17U901146
  • GC17M028044

Summaries for RPL21P123 Gene

GeneCards Summary for RPL21P123 Gene

RPL21P123 (Ribosomal Protein L21 Pseudogene 123) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P123 Gene

Genomics for RPL21P123 Gene

Regulatory Elements for RPL21P123 Gene

Enhancers for RPL21P123 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F029709 1.4 FANTOM5 ENCODE 0.8 +4.7 4709 5.7 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF143 FOS CORO6 SUZ12P1 LRRC37BP1 RNU6-920P SMURF2P1 RPL21P123 ENSG00000265625
GH17F029718 1.3 FANTOM5 ENCODE 0.4 -5.3 -5290 6.5 HDGF PKNOX1 ATF1 WRNIP1 GATA2 ELK1 ZNF143 JUNB TBX21 KAT8 CORO6 RNU6-920P NUFIP2 SSH2 TAOK1 RPL21P123 ENSG00000263657
GH17F029703 1 FANTOM5 ENCODE 0.4 +10.4 10439 5.0 HDGF ATF1 PKNOX1 ARNT CREB3L1 WRNIP1 SIN3A YBX1 YY1 ZNF207 CORO6 RNU6-920P NUFIP2 TAOK1 SSH2 RPL21P123 ENSG00000265625
GH17F029725 1.2 FANTOM5 ENCODE 0.4 -10.2 -10215 2.5 TBP HDAC1 PKNOX1 ATF1 TBL1XR1 NFRKB ZBTB40 GATA2 SCRT2 ETV6 RNU6-920P CORO6 ENSG00000239129 NUFIP2 TAOK1 RPL21P123 ENSG00000263657
GH17F029731 1.2 Ensembl ENCODE 0.3 -16.8 -16777 3.8 HDGF PKNOX1 ZNF140 ZBTB40 ZNF664 ZNF791 ZNF354C ZNF433 ZNF202 ZNF680 CORO6 SH3GL1P2 SMURF2P1 NUFIP2 LRRC37BP1 RNU6-920P SUZ12P1 ANKRD13B ENSG00000239129 LOC101927093
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL21P123 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P123 Gene

Chromosome:
17
Start:
29,716,279 bp from pter
End:
29,716,725 bp from pter
Size:
447 bases
Orientation:
Minus strand

Genomic View for RPL21P123 Gene

Genes around RPL21P123 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P123 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P123 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P123 Gene

Proteins for RPL21P123 Gene

Post-translational modifications for RPL21P123 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P123 Gene

Domains & Families for RPL21P123 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P123 Gene

Function for RPL21P123 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P123 Gene

Localization for RPL21P123 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P123 Gene

Pathways & Interactions for RPL21P123 Gene

SuperPathways for RPL21P123 Gene

No Data Available

Interacting Proteins for RPL21P123 Gene

Gene Ontology (GO) - Biological Process for RPL21P123 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P123 Gene

Transcripts for RPL21P123 Gene

mRNA/cDNA for RPL21P123 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P123 Gene

No ASD Table

Relevant External Links for RPL21P123 Gene

GeneLoc Exon Structure for
RPL21P123
ECgene alternative splicing isoforms for
RPL21P123

Expression for RPL21P123 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P123 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P123 Gene:

RPL21P123
genes like me logo Genes that share expression patterns with RPL21P123: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P123 Gene

Orthologs for RPL21P123 Gene

Evolution for RPL21P123 Gene

ENSEMBL:
Gene Tree for RPL21P123 (if available)
TreeFam:
Gene Tree for RPL21P123 (if available)

No data available for Orthologs for RPL21P123 Gene

Paralogs for RPL21P123 Gene

No data available for Paralogs for RPL21P123 Gene

Variants for RPL21P123 Gene

Relevant External Links for RPL21P123 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P123

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P123 Gene

Disorders for RPL21P123 Gene

No disorders were found for RPL21P123 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P123 Gene

Publications for RPL21P123 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL21P123 Gene

Sources for RPL21P123 Gene

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