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Aliases for RPL21P119 Gene

Aliases for RPL21P119 Gene

  • Ribosomal Protein L21 Pseudogene 119 2 3 5
  • RPL21_56_1471 3

External Ids for RPL21P119 Gene

Previous GeneCards Identifiers for RPL21P119 Gene

  • GC16M009160
  • GC16M009161
  • GC16M009251

Summaries for RPL21P119 Gene

GeneCards Summary for RPL21P119 Gene

RPL21P119 (Ribosomal Protein L21 Pseudogene 119) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P119 Gene

Genomics for RPL21P119 Gene

Regulatory Elements for RPL21P119 Gene

Enhancers for RPL21P119 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G009160 0.8 ENCODE 0.7 -3.4 -3378 0.2 CTCF TFAP4 TEAD4 ZNF48 RAD21 TEAD3 ZNF143 SMC3 MIXL1 TCF7L2 RPL21P119 PIR34415
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P119 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P119 Gene

Chromosome:
16
Start:
9,156,342 bp from pter
End:
9,156,921 bp from pter
Size:
580 bases
Orientation:
Minus strand

Genomic View for RPL21P119 Gene

Genes around RPL21P119 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P119 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P119 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P119 Gene

Proteins for RPL21P119 Gene

Post-translational modifications for RPL21P119 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P119 Gene

Domains & Families for RPL21P119 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P119 Gene

Function for RPL21P119 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P119 Gene

Localization for RPL21P119 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P119 Gene

Pathways & Interactions for RPL21P119 Gene

SuperPathways for RPL21P119 Gene

No Data Available

Interacting Proteins for RPL21P119 Gene

Gene Ontology (GO) - Biological Process for RPL21P119 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P119 Gene

Drugs & Compounds for RPL21P119 Gene

No Compound Related Data Available

Transcripts for RPL21P119 Gene

mRNA/cDNA for RPL21P119 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P119 Gene

No ASD Table

Relevant External Links for RPL21P119 Gene

GeneLoc Exon Structure for
RPL21P119
ECgene alternative splicing isoforms for
RPL21P119

Expression for RPL21P119 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P119 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P119 Gene

This gene is overexpressed in Heart - Left Ventricle (x4.2).

Protein differential expression in normal tissues from HIPED for RPL21P119 Gene

This gene is overexpressed in Heart (61.8) and Brain (7.2).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for RPL21P119 Gene



Protein tissue co-expression partners for RPL21P119 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of RPL21P119 Gene:

RPL21P119
genes like me logo Genes that share expression patterns with RPL21P119: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P119 Gene

Orthologs for RPL21P119 Gene

Evolution for RPL21P119 Gene

ENSEMBL:
Gene Tree for RPL21P119 (if available)
TreeFam:
Gene Tree for RPL21P119 (if available)

No data available for Orthologs for RPL21P119 Gene

Paralogs for RPL21P119 Gene

No data available for Paralogs for RPL21P119 Gene

Variants for RPL21P119 Gene

Relevant External Links for RPL21P119 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P119

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P119 Gene

Disorders for RPL21P119 Gene

Relevant External Links for RPL21P119

Genetic Association Database (GAD)
RPL21P119

No disorders were found for RPL21P119 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P119 Gene

Publications for RPL21P119 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3 64
  3. A genome-wide meta-analysis of genetic variants associated with allergic rhinitis and grass sensitization and their interaction with birth order. (PMID: 22036096) Ramasamy A. … Jarvis D.L. (J. Allergy Clin. Immunol. 2011) 46 64
  4. Genomewide association study for determinants of HIV-1 acquisition and viral set point in HIV-1 serodiscordant couples with quantified virus exposure. (PMID: 22174851) Lingappa J.R. … Goldstein D. (PLoS ONE 2011) 46 64
  5. GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease. (PMID: 21658281) Aouizerat B.E. … Tseng Z.H. (BMC Cardiovasc Disord 2011) 46 64

Products for RPL21P119 Gene

Sources for RPL21P119 Gene

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