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RPL21P117 Gene(Pseudogene)

Ribosomal Protein L21 Pseudogene 117

GCID:
GC15M059552
GIFtS:
10
Genes Participants
UDN Logo

Aliases for RPL21P117 Gene

Aliases for RPL21P117 Gene

  • Ribosomal Protein L21 Pseudogene 117 2 3
  • RPL21_53_1439 3
  • RP11-112N19.2 5

External Ids for RPL21P117 Gene

Previous GeneCards Identifiers for RPL21P117 Gene

  • GC15U901024
  • GC15M059845

Summaries for RPL21P117 Gene

GeneCards Summary for RPL21P117 Gene

RPL21P117 (Ribosomal Protein L21 Pseudogene 117) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P117 Gene

Genomics for RPL21P117 Gene

Products:

  1. Regulatory Element

Regulatory Elements for RPL21P117 Gene

Enhancers for RPL21P117 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F059553 1.6 FANTOM5 Ensembl ENCODE 0.8 -2.3 -2336 3.5 ATF1 MLX ZNF48 GTF3C2 FOS SP5 NFYC MXD4 PPARG KAT8 PIGHP1 RPS3AP6 GCNT3 RPL21P117 RNA5SP396 GC15M059576
GH15F059567 1.1 FANTOM5 ENCODE 0.3 -16.2 -16154 3.6 GTF2F1 PKNOX1 JUN MAX CEBPG RAD21 BRCA1 RFX5 GATA3 CTBP1 GC15M059576 RNA5SP396 RPL21P117
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P117 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P117 Gene

Chromosome:
15
Start:
59,552,572 bp from pter
End:
59,553,133 bp from pter
Size:
562 bases
Orientation:
Minus strand

Genomic View for RPL21P117 Gene

Genes around RPL21P117 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P117 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P117 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL21P117 Gene

Proteins for RPL21P117 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL21P117 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P117 Gene

Domains & Families for RPL21P117 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P117 Gene

Function for RPL21P117 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P117 Gene

Localization for RPL21P117 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL21P117 Gene

Pathways & Interactions for RPL21P117 Gene

SuperPathways for RPL21P117 Gene

PathCards logo More details on SuperPathways for RPL21P117
No Data Available

Interacting Proteins for RPL21P117 Gene

Gene Ontology (GO) - Biological Process for RPL21P117 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P117 Gene

Drugs & Compounds for RPL21P117 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL21P117 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for RPL21P117 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P117 Gene

No ASD Table

Relevant External Links for RPL21P117 Gene

GeneLoc Exon Structure for
RPL21P117
ECgene alternative splicing isoforms for
RPL21P117

Expression for RPL21P117 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P117 Gene

mRNA expression in normal human tissues for RPL21P117 Gene
mRNA expression by GTEx for RPL21P117 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P117 Gene:

RPL21P117
genes like me logo Genes that share expression patterns with RPL21P117: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL21P117 Gene

Orthologs for RPL21P117 Gene

Evolution for RPL21P117 Gene

ENSEMBL:
Gene Tree for RPL21P117 (if available)
TreeFam:
Gene Tree for RPL21P117 (if available)

No data available for Orthologs for RPL21P117 Gene

Paralogs for RPL21P117 Gene

No data available for Paralogs for RPL21P117 Gene

Variants for RPL21P117 Gene

Relevant External Links for RPL21P117 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P117

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P117 Gene

Disorders for RPL21P117 Gene

No disorders were found for RPL21P117 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P117 Gene

Publications for RPL21P117 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL21P117 Gene

Sources for RPL21P117 Gene

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