Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL21P116 Gene

Aliases for RPL21P116 Gene

  • Ribosomal Protein L21 Pseudogene 116 2 3
  • RPL21_55_1456 3
  • AC103975.1 5

External Ids for RPL21P116 Gene

Previous GeneCards Identifiers for RPL21P116 Gene

  • GC15U901025
  • GC15M079156

Summaries for RPL21P116 Gene

GeneCards Summary for RPL21P116 Gene

RPL21P116 (Ribosomal Protein L21 Pseudogene 116) is a Pseudogene.

Additional gene information for RPL21P116 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P116 Gene

Genomics for RPL21P116 Gene

Regulatory Elements for RPL21P116 Gene

Enhancers for RPL21P116 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15H078871 1.4 ENCODE dbSUPER 0.4 -10.0 -10037 4 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 IREB2 ENSG00000259562 PSMA4 RNU6-415P ENSG00000260988 WDR61 ENSG00000177699 TBC1D2B CHRNA3 MORF4L1
GH15H078877 0.8 ENCODE dbSUPER 0.4 -13.3 -13320 0 KLF1 ZNF362 ZMYM3 ZNF384 RNU6-415P ADAMTS7 ENSG00000177699 CTSH MORF4L1 RPL21P116
GH15H078878 0.8 ENCODE 0.4 -15.6 -15616 2 LEF1 ATF1 FEZF1 ZNF316 ZSCAN5C PATZ1 FOS ZNF600 RUNX3 MAFK ENSG00000177699 MORF4L1 ADAMTS7 CTSH RPL21P116 RNU6-415P
GH15H078876 0.8 ENCODE dbSUPER 0.4 -12.7 -12743 0 LEF1 ZNF316 PRDM6 YY2 EMSY TCF7L2 RNU6-415P ENSG00000177699 RPL21P116
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL21P116 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL21P116 Gene

Chromosome:
15
Start:
78,863,212 bp from pter
End:
78,863,771 bp from pter
Size:
560 bases
Orientation:
Minus strand

Genomic View for RPL21P116 Gene

Genes around RPL21P116 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P116 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P116 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P116 Gene

Proteins for RPL21P116 Gene

Post-translational modifications for RPL21P116 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P116 Gene

Domains & Families for RPL21P116 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P116 Gene

Function for RPL21P116 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL21P116
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P116 Gene

Localization for RPL21P116 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P116 Gene

Pathways & Interactions for RPL21P116 Gene

SuperPathways for RPL21P116 Gene

No Data Available

Interacting Proteins for RPL21P116 Gene

Gene Ontology (GO) - Biological Process for RPL21P116 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P116 Gene

Drugs & Compounds for RPL21P116 Gene

No Compound Related Data Available

Transcripts for RPL21P116 Gene

mRNA/cDNA for RPL21P116 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL21P116
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P116 Gene

No ASD Table

Relevant External Links for RPL21P116 Gene

GeneLoc Exon Structure for
RPL21P116
ECgene alternative splicing isoforms for
RPL21P116

Expression for RPL21P116 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P116 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P116 Gene

This gene is overexpressed in Testis (x8.3) and Heart - Atrial Appendage (x7.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL21P116 Gene:

RPL21P116
genes like me logo Genes that share expression patterns with RPL21P116: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P116 Gene

Orthologs for RPL21P116 Gene

Evolution for RPL21P116 Gene

ENSEMBL:
Gene Tree for RPL21P116 (if available)
TreeFam:
Gene Tree for RPL21P116 (if available)

No data available for Orthologs for RPL21P116 Gene

Paralogs for RPL21P116 Gene

No data available for Paralogs for RPL21P116 Gene

Variants for RPL21P116 Gene

Relevant External Links for RPL21P116 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P116

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P116 Gene

Disorders for RPL21P116 Gene

No disorders were found for RPL21P116 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P116 Gene

Publications for RPL21P116 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPL21P116 Gene

Sources for RPL21P116 Gene

Content
Loading form....