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Aliases for RPL21P105 Gene

Aliases for RPL21P105 Gene

  • Ribosomal Protein L21 Pseudogene 105 2 3
  • RPL21_43_1282 3
  • AC090013.1 5

External Ids for RPL21P105 Gene

Previous GeneCards Identifiers for RPL21P105 Gene

  • GC12M115679
  • GC12M117194

Summaries for RPL21P105 Gene

GeneCards Summary for RPL21P105 Gene

RPL21P105 (Ribosomal Protein L21 Pseudogene 105) is a Pseudogene.

Additional gene information for RPL21P105 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P105 Gene

Genomics for RPL21P105 Gene

GeneHancer (GH) Regulatory Elements for RPL21P105 Gene

Promoters and enhancers for RPL21P105 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I116802 Enhancer 0.8 FANTOM5 ENCODE dbSUPER 5.2 -48.1 -48120 3 ZNF121 POLR2A RPL21P105 HRK C12orf49 ENSG00000275467 GC12M116856 RNFT2
GH12I116806 Enhancer 0.6 dbSUPER 5.2 -52.2 -52179 3.5 BCOR STAT1 ZMYM3 ELF1 E4F1 ZNF121 NFIC PHF20 HDAC2 GABPB1 RPL21P105 ENSG00000275467 GC12M116856 RNFT2
GH12I116759 Enhancer 1.1 Ensembl ENCODE 0.8 -4.3 -4252 1.6 HDAC1 HDGF ATF1 SMAD1 TAF9B RB1 NFIB NFRKB CHAMP1 POLR2B FBXW8 MED13L ENSG00000258034 RPL21P105 RNFT2 GC12P116783
GH12I116773 Enhancer 0.3 ENCODE 0.4 -17.4 -17434 0.2 CTCF GC12P116783 RPL21P105 RNFT2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL21P105 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P105 Gene

Genomic Locations for RPL21P105 Gene
chr12:116,755,353-116,755,917
(GRCh38/hg38)
Size:
565 bases
Orientation:
Minus strand
chr12:117,193,158-117,193,722
(GRCh37/hg19)

Genomic View for RPL21P105 Gene

Genes around RPL21P105 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P105 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P105 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P105 Gene

Proteins for RPL21P105 Gene

Post-translational modifications for RPL21P105 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P105 Gene

Domains & Families for RPL21P105 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P105 Gene

Function for RPL21P105 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P105 Gene

Localization for RPL21P105 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P105 Gene

Pathways & Interactions for RPL21P105 Gene

SuperPathways for RPL21P105 Gene

No Data Available

Interacting Proteins for RPL21P105 Gene

Gene Ontology (GO) - Biological Process for RPL21P105 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P105 Gene

Drugs & Compounds for RPL21P105 Gene

No Compound Related Data Available

Transcripts for RPL21P105 Gene

mRNA/cDNA for RPL21P105 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P105 Gene

No ASD Table

Relevant External Links for RPL21P105 Gene

GeneLoc Exon Structure for
RPL21P105
ECgene alternative splicing isoforms for
RPL21P105

Expression for RPL21P105 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P105 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P105 Gene

This gene is overexpressed in Testis (x5.4).

NURSA nuclear receptor signaling pathways regulating expression of RPL21P105 Gene:

RPL21P105
genes like me logo Genes that share expression patterns with RPL21P105: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P105 Gene

Orthologs for RPL21P105 Gene

Evolution for RPL21P105 Gene

ENSEMBL:
Gene Tree for RPL21P105 (if available)
TreeFam:
Gene Tree for RPL21P105 (if available)

No data available for Orthologs for RPL21P105 Gene

Paralogs for RPL21P105 Gene

No data available for Paralogs for RPL21P105 Gene

Variants for RPL21P105 Gene

Additional Variant Information for RPL21P105 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P105

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P105 Gene

Disorders for RPL21P105 Gene

Additional Disease Information for RPL21P105

Genetic Association Database
(GAD)

No disorders were found for RPL21P105 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P105 Gene

Publications for RPL21P105 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association analysis of age-at-onset in Alzheimer's disease. (PMID: 22005931) Kamboh MI … Lopez OL (Molecular psychiatry 2012) 44 58

Products for RPL21P105 Gene

Sources for RPL21P105 Gene

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