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Aliases for RPL21P1 Gene

Aliases for RPL21P1 Gene

  • Ribosomal Protein L21 Pseudogene 1 2 3 5
  • Ribosomal Protein L21 Pseudogene 2
  • RPL21P 3

External Ids for RPL21P1 Gene

Previous HGNC Symbols for RPL21P1 Gene

  • RPL21P

Previous GeneCards Identifiers for RPL21P1 Gene

  • GC12U990088
  • GC12P122657
  • GC12P121286
  • GC12P121374
  • GC12P122849

Summaries for RPL21P1 Gene

GeneCards Summary for RPL21P1 Gene

RPL21P1 (Ribosomal Protein L21 Pseudogene 1) is a Pseudogene. Diseases associated with RPL21P1 include Ribosomal Protein L21 Pseudogene 1.

Additional gene information for RPL21P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P1 Gene

Genomics for RPL21P1 Gene

GeneHancer (GH) Regulatory Elements for RPL21P1 Gene

Promoters and enhancers for RPL21P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I122363 Enhancer 0.4 ENCODE dbSUPER 550.8 -0.7 -737 0.3 RPL21P1 CLIP1 DIABLO VPS33A ENSG00000256861 CCDC150P1
GH12I122365 Enhancer 1.5 Ensembl ENCODE dbSUPER 0.8 +3.1 3143 4.8 PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZNF766 ZNF213 CLIP1 ZCCHC8 RSRC2 ENSG00000235423 ANAPC5 SETD1B DIABLO ENSG00000252192 VPS33A ENSG00000256861
GH12I122394 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +30.7 30674 1.3 ATF1 ZBTB21 JUN INSM2 CEBPG YY1 ZNF335 CTBP1 GATA3 ZNF366 CLIP1-AS1 CLIP1 RPL21P1
GH12I122356 Enhancer 0.7 ENCODE 0.4 -8.4 -8383 0.2 CTCF RB1 ZBTB21 ARNT CEBPG RAD21 SMC3 ZNF143 RCOR1 CHD2 CLIP1 B3GNT4 LRRC43 ENSG00000252192 DIABLO RPL21P1 CCDC150P1
GH12I122332 Enhancer 0.9 ENCODE 0.3 -31.1 -31142 1.8 HDGF ATF1 PKNOX1 SMAD1 NCOA2 TCF12 ZNF766 ATF7 ZNF592 MEF2D CLIP1 ZCCHC8 CCDC150P1 RPL21P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL21P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P1 Gene

Genomic Locations for RPL21P1 Gene
chr12:122,364,742-122,365,674
(GRCh38/hg38)
Size:
933 bases
Orientation:
Plus strand
chr12:122,849,289-122,850,239
(GRCh37/hg19)

Genomic View for RPL21P1 Gene

Genes around RPL21P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P1 Gene

Proteins for RPL21P1 Gene

Post-translational modifications for RPL21P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P1 Gene

Domains & Families for RPL21P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P1 Gene

Function for RPL21P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P1 Gene

Localization for RPL21P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P1 Gene

Pathways & Interactions for RPL21P1 Gene

SuperPathways for RPL21P1 Gene

No Data Available

Interacting Proteins for RPL21P1 Gene

Gene Ontology (GO) - Biological Process for RPL21P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P1 Gene

Drugs & Compounds for RPL21P1 Gene

No Compound Related Data Available

Transcripts for RPL21P1 Gene

mRNA/cDNA for RPL21P1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P1 Gene

No ASD Table

Relevant External Links for RPL21P1 Gene

GeneLoc Exon Structure for
RPL21P1
ECgene alternative splicing isoforms for
RPL21P1

Expression for RPL21P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P1 Gene:

RPL21P1
genes like me logo Genes that share expression patterns with RPL21P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P1 Gene

Orthologs for RPL21P1 Gene

Evolution for RPL21P1 Gene

ENSEMBL:
Gene Tree for RPL21P1 (if available)
TreeFam:
Gene Tree for RPL21P1 (if available)

No data available for Orthologs for RPL21P1 Gene

Paralogs for RPL21P1 Gene

No data available for Paralogs for RPL21P1 Gene

Variants for RPL21P1 Gene

Additional Variant Information for RPL21P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P1 Gene

Disorders for RPL21P1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for RPL21P1 Gene - From: OMIM and GeneCards

Disorder Aliases PubMed IDs
ribosomal protein l21 pseudogene 1
  • rpl21p1
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with RPL21P1: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P1 Gene

Publications for RPL21P1 Gene

  1. Chromosomal localization and sequence analysis of a human episomal sequence with in vitro differentiating activity. (PMID: 7940018) Boccaccio C … Meunier-Rotival M (Somatic cell and molecular genetics 1994) 2 3 58

Products for RPL21P1 Gene

Sources for RPL21P1 Gene

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