Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL19P6 Gene

Aliases for RPL19P6 Gene

  • Ribosomal Protein L19 Pseudogene 6 2 3
  • RP11-343B5.1 5
  • RPL19_2_411 3

External Ids for RPL19P6 Gene

Previous GeneCards Identifiers for RPL19P6 Gene

  • GC03U901214
  • GC03M141763

Summaries for RPL19P6 Gene

GeneCards Summary for RPL19P6 Gene

RPL19P6 (Ribosomal Protein L19 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL19P6 Gene

Genomics for RPL19P6 Gene

Regulatory Elements for RPL19P6 Gene

Enhancers for RPL19P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F142613 0.4 ENCODE 12.1 -569.9 -569871 1.8 EHMT2 BCL6 RNA5SP143 RPL19P6 ATR PLS1 PLS1-AS1
GH03F141552 0.7 Ensembl ENCODE 6 +491.3 491325 1.8 GATAD2A TFAP4 ZNF24 RASA2 RPL19P6 ZBTB38 RASA2-IT1 GC03M141600
GH03F142045 1.2 Ensembl ENCODE 0.8 -2.5 -2532 2.4 ATF1 ARNT GATA2 SMARCB1 KAT8 MBD2 SMARCA4 MYNN HMBOX1 KDM1A XRN1 RNU6-425P ATP1B3 RPL19P6 GC03P142146
GH03F142019 1.4 Ensembl ENCODE 0.3 +24.1 24125 1.8 PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF766 ZNF143 ZNF207 FOS RNU6-425P GK5 ATP1B3 RPL19P6 PIR46950
GH03F142021 1.2 Ensembl ENCODE 0.3 +21.9 21907 1.4 PKNOX1 ARNT ELK1 GATA2 REST CREB3 SMARCA4 PBX2 NBN HMBOX1 RNU6-425P GK5 RPL19P6 PIR46950
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL19P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL19P6 Gene

Chromosome:
3
Start:
142,043,544 bp from pter
End:
142,044,225 bp from pter
Size:
682 bases
Orientation:
Minus strand

Genomic View for RPL19P6 Gene

Genes around RPL19P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL19P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL19P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL19P6 Gene

Proteins for RPL19P6 Gene

Post-translational modifications for RPL19P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL19P6 Gene

Domains & Families for RPL19P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL19P6 Gene

Function for RPL19P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL19P6 Gene

Localization for RPL19P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL19P6 Gene

Pathways & Interactions for RPL19P6 Gene

SuperPathways for RPL19P6 Gene

No Data Available

Interacting Proteins for RPL19P6 Gene

Gene Ontology (GO) - Biological Process for RPL19P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL19P6 Gene

Transcripts for RPL19P6 Gene

mRNA/cDNA for RPL19P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL19P6 Gene

No ASD Table

Relevant External Links for RPL19P6 Gene

GeneLoc Exon Structure for
RPL19P6
ECgene alternative splicing isoforms for
RPL19P6

Expression for RPL19P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL19P6 Gene

mRNA differential expression in normal tissues according to GTEx for RPL19P6 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of RPL19P6 Gene:

RPL19P6
genes like me logo Genes that share expression patterns with RPL19P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL19P6 Gene

Orthologs for RPL19P6 Gene

Evolution for RPL19P6 Gene

ENSEMBL:
Gene Tree for RPL19P6 (if available)
TreeFam:
Gene Tree for RPL19P6 (if available)

No data available for Orthologs for RPL19P6 Gene

Paralogs for RPL19P6 Gene

No data available for Paralogs for RPL19P6 Gene

Variants for RPL19P6 Gene

Relevant External Links for RPL19P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL19P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL19P6 Gene

Disorders for RPL19P6 Gene

Relevant External Links for RPL19P6

Genetic Association Database (GAD)
RPL19P6

No disorders were found for RPL19P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL19P6 Gene

Publications for RPL19P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. New loci associated with kidney function and chronic kidney disease. (PMID: 20383146) KAPttgen A. … Fox C.S. (Nat. Genet. 2010) 46 64

Products for RPL19P6 Gene

Sources for RPL19P6 Gene

Content
Loading form....