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Aliases for RPL19P12 Gene

Aliases for RPL19P12 Gene

  • Ribosomal Protein L19 Pseudogene 12 2 3
  • RP11-401L13.4 5
  • RPL19_4_829 3

External Ids for RPL19P12 Gene

Previous GeneCards Identifiers for RPL19P12 Gene

  • GC07M102570
  • GC07M102782
  • GC07M097144

Summaries for RPL19P12 Gene

GeneCards Summary for RPL19P12 Gene

RPL19P12 (Ribosomal Protein L19 Pseudogene 12) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL19P12 Gene

Genomics for RPL19P12 Gene

Regulatory Elements for RPL19P12 Gene

Enhancers for RPL19P12 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G103660 1.3 Ensembl ENCODE 4.4 -519.3 -519305 3.1 PKNOX1 FOXA2 MLX ARNT ARID4B DMAP1 YY1 SLC30A9 ZNF766 FOS RELN RPL19P12 PIR34993 GC07P103650 GC07P103649 GC07P103686
GH07G103119 1 dbSUPER 0.3 +21.9 21857 2.3 PKNOX1 ATF1 CREB3L1 ARNT E2F7 TCF12 ZNF766 CBX5 ELK1 GATA2 NAPEPLD ARMC10 RPL19P12 CRYZP1
GH07G103105 0.9 ENCODE 0.3 +35.8 35841 1.2 ELF3 FOXA2 ARID4B DMAP1 RAD21 THRB ZNF48 ZSCAN9 RARA MIXL1 ARMC10 CRYZP1 RPL19P12
GH07G103112 0.9 ENCODE dbSUPER 0.3 +29.0 29045 1.2 SCRT1 CEBPB JUND ZFHX2 SCRT2 FOS EGR2 SP7 NAPEPLD RASA4DP CRYZP1 RPL19P12
GH07G103132 0.6 dbSUPER 0.4 +9.0 8994 1.3 SCRT1 NR2F1 MAFG ZNF316 SCRT2 NR2C1 NR2F6 HNF4A MAFK EMSY NAPEPLD ARMC10 RPL19P12 CRYZP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL19P12 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL19P12 Gene

Chromosome:
7
Start:
103,141,270 bp from pter
End:
103,142,403 bp from pter
Size:
1,134 bases
Orientation:
Minus strand

Genomic View for RPL19P12 Gene

Genes around RPL19P12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL19P12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL19P12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL19P12 Gene

Proteins for RPL19P12 Gene

Post-translational modifications for RPL19P12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL19P12 Gene

Domains & Families for RPL19P12 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL19P12 Gene

Function for RPL19P12 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL19P12 Gene

Localization for RPL19P12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL19P12 Gene

Pathways & Interactions for RPL19P12 Gene

SuperPathways for RPL19P12 Gene

No Data Available

Interacting Proteins for RPL19P12 Gene

Gene Ontology (GO) - Biological Process for RPL19P12 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL19P12 Gene

Transcripts for RPL19P12 Gene

mRNA/cDNA for RPL19P12 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPL19P12 Gene

Ribosomal protein L19 pseudogene 12:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPL19P12 Gene

No ASD Table

Relevant External Links for RPL19P12 Gene

GeneLoc Exon Structure for
RPL19P12
ECgene alternative splicing isoforms for
RPL19P12

Expression for RPL19P12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL19P12 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL19P12 Gene:

RPL19P12

SOURCE GeneReport for Unigene cluster for RPL19P12 Gene:

Hs.720729
genes like me logo Genes that share expression patterns with RPL19P12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL19P12 Gene

Orthologs for RPL19P12 Gene

Evolution for RPL19P12 Gene

ENSEMBL:
Gene Tree for RPL19P12 (if available)
TreeFam:
Gene Tree for RPL19P12 (if available)

No data available for Orthologs for RPL19P12 Gene

Paralogs for RPL19P12 Gene

No data available for Paralogs for RPL19P12 Gene

Variants for RPL19P12 Gene

Sequence variations from dbSNP and Humsavar for RPL19P12 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000442401 -- 103,142,903(+) AACAG(C/T)GGAGA intron-variant, upstream-variant-2KB
rs1001658916 -- 103,142,633(+) TCCAA(A/C)TGAGT intron-variant, upstream-variant-2KB
rs1003130034 -- 103,143,920(+) TCAAG(A/C)AATCC intron-variant, upstream-variant-2KB
rs1005558594 -- 103,142,250(+) GAGAG(A/G)CAGCA intron-variant, nc-transcript-variant
rs1006563508 -- 103,143,595(+) TGCAT(A/C)TGGCT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for RPL19P12 Gene

Variant ID Type Subtype PubMed ID
esv2752138 CNV loss 17911159
nsv831084 CNV gain 17160897
nsv970565 CNV duplication 23825009

Relevant External Links for RPL19P12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL19P12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPL19P12 Gene

Disorders for RPL19P12 Gene

Relevant External Links for RPL19P12

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPL19P12

No disorders were found for RPL19P12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL19P12 Gene

Publications for RPL19P12 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL19P12 Gene

Sources for RPL19P12 Gene

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