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Aliases for RPL19P12 Gene

Aliases for RPL19P12 Gene

  • Ribosomal Protein L19 Pseudogene 12 2 3
  • RPL19_4_829 3
  • AC007683.1 5

External Ids for RPL19P12 Gene

Previous GeneCards Identifiers for RPL19P12 Gene

  • GC07M102570
  • GC07M102782
  • GC07M097144

Summaries for RPL19P12 Gene

GeneCards Summary for RPL19P12 Gene

RPL19P12 (Ribosomal Protein L19 Pseudogene 12) is a Pseudogene.

Additional gene information for RPL19P12 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL19P12 Gene

Genomics for RPL19P12 Gene

GeneHancer (GH) Regulatory Elements for RPL19P12 Gene

Promoters and enhancers for RPL19P12 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I103141 Promoter 0.5 EPDnew 550.8 +0.4 416 0.1 NAPEPLD RPL19P12 PMPCB CRYZP1
GH07I103660 Enhancer 1.2 Ensembl ENCODE 4.4 -519.3 -519304 3.1 PKNOX1 FOXA2 MLX ARNT ARID4B DMAP1 YY1 SLC30A9 ZNF766 FOS CRYZP1 ENSG00000213385 PMPCB FAM185A ORC5 DNAJC2 RELN RPL19P12 GC07P103649 GC07P103650
GH07I103119 Enhancer 1 dbSUPER 0.3 +21.9 21856 2.3 PKNOX1 ATF1 ARNT NCOA2 TCF12 ZNF766 CBX5 GATA2 E2F8 ATF7 NAPEPLD ARMC10 RPL19P12 CRYZP1
GH07I103132 Enhancer 0.6 dbSUPER 0.4 +9.0 8993 1.3 SCRT1 ZNF316 SCRT2 MAFG NR2C1 HNF4A MAFK EMSY NAPEPLD ARMC10 RPL19P12 CRYZP1
GH07I103105 Enhancer 0.8 ENCODE 0.3 +35.8 35841 1.2 ELF3 FOXA2 ARID4B DMAP1 RAD21 THRB ZNF48 ZSCAN9 RARA THAP11 ARMC10 CRYZP1 RPL19P12 NAPEPLD
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL19P12 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the RPL19P12 gene promoter:

Genomic Locations for RPL19P12 Gene

Genomic Locations for RPL19P12 Gene
chr7:103,141,270-103,142,403
(GRCh38/hg38)
Size:
1,134 bases
Orientation:
Minus strand
chr7:102,781,717-102,782,850
(GRCh37/hg19)

Genomic View for RPL19P12 Gene

Genes around RPL19P12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL19P12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL19P12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL19P12 Gene

Proteins for RPL19P12 Gene

Post-translational modifications for RPL19P12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL19P12 Gene

Domains & Families for RPL19P12 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL19P12 Gene

Function for RPL19P12 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL19P12 Gene

Localization for RPL19P12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL19P12 Gene

Pathways & Interactions for RPL19P12 Gene

SuperPathways for RPL19P12 Gene

No Data Available

Interacting Proteins for RPL19P12 Gene

Gene Ontology (GO) - Biological Process for RPL19P12 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL19P12 Gene

Drugs & Compounds for RPL19P12 Gene

No Compound Related Data Available

Transcripts for RPL19P12 Gene

mRNA/cDNA for RPL19P12 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPL19P12 Gene

Ribosomal protein L19 pseudogene 12:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL19P12 Gene

No ASD Table

Relevant External Links for RPL19P12 Gene

GeneLoc Exon Structure for
RPL19P12
ECgene alternative splicing isoforms for
RPL19P12

Expression for RPL19P12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL19P12 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL19P12 Gene:

RPL19P12

SOURCE GeneReport for Unigene cluster for RPL19P12 Gene:

Hs.720729
genes like me logo Genes that share expression patterns with RPL19P12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL19P12 Gene

Orthologs for RPL19P12 Gene

Evolution for RPL19P12 Gene

ENSEMBL:
Gene Tree for RPL19P12 (if available)
TreeFam:
Gene Tree for RPL19P12 (if available)

No data available for Orthologs for RPL19P12 Gene

Paralogs for RPL19P12 Gene

No data available for Paralogs for RPL19P12 Gene

Variants for RPL19P12 Gene

Sequence variations from dbSNP and Humsavar for RPL19P12 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000442401 -- 103,142,903(-) T/C upstream_transcript_variant
rs1001658916 -- 103,142,633(-) C/A upstream_transcript_variant
rs1003130034 -- 103,143,920(-) C/A upstream_transcript_variant
rs1005558594 -- 103,142,250(-) G/A non_coding_transcript_variant
rs1006563508 -- 103,143,595(-) C/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for RPL19P12 Gene

Variant ID Type Subtype PubMed ID
esv2752138 CNV loss 17911159
nsv831084 CNV gain 17160897
nsv970565 CNV duplication 23825009

Additional Variant Information for RPL19P12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL19P12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPL19P12 Gene

Disorders for RPL19P12 Gene

Additional Disease Information for RPL19P12

No disorders were found for RPL19P12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL19P12 Gene

Publications for RPL19P12 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL19P12 Gene

Sources for RPL19P12 Gene

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