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Aliases for RPL18P9 Gene

Aliases for RPL18P9 Gene

  • Ribosomal Protein L18 Pseudogene 9 2 3
  • RPL18_3_1196 3
  • RP11-320N7.1 5

External Ids for RPL18P9 Gene

Previous GeneCards Identifiers for RPL18P9 Gene

  • GC12M004219

Summaries for RPL18P9 Gene

GeneCards Summary for RPL18P9 Gene

RPL18P9 (Ribosomal Protein L18 Pseudogene 9) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL18P9 Gene

Genomics for RPL18P9 Gene

Regulatory Elements for RPL18P9 Gene

Enhancers for RPL18P9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F004019 0.2 Ensembl 6.7 +100.3 100255 1.0 ENSG00000256969 RPL18P9 LOC105369611
GH12F004023 1 Ensembl ENCODE 5.1 +94.2 94155 4.8 HDGF PKNOX1 MLX SIN3A YBX1 ZNF48 ETS1 ZNF143 ZNF207 JUNB CCND2-AS1 CCND2 CCND2-AS2 ENSG00000256969 HSPA8P5 RPL18P9
GH12F004030 1.4 FANTOM5 Ensembl ENCODE 5 +87.5 87513 4.2 HDGF PKNOX1 ZFP64 SIN3A FEZF1 GLIS2 KLF7 FOS JUNB REST CCND2 CCND2-AS2 CCND2-AS1 ENSG00000256969 HSPA8P5 RPL18P9 PARP11
GH12F004133 1.7 FANTOM5 Ensembl ENCODE 0.3 -15.5 -15546 5.0 HDGF TBP PKNOX1 ATF1 TBL1XR1 WRNIP1 SIN3A YBX1 BMI1 ZBTB40 CCND2 CCND2-AS2 CCND2-AS1 HSPA8P5 PARP11 C12orf4 GC12P005177 RPL18P9
GH12F004140 1.3 FANTOM5 Ensembl ENCODE 0.3 -22.3 -22271 4.0 HDGF PKNOX1 ZNF133 ZNF366 EGR1 ETV6 JUNB ZEB2 TBX21 IKZF1 HSPA8P5 PARP11 CRACR2A CCND2 C12orf4 GC12P005177 RPL18P9
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL18P9 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL18P9 Gene

Chromosome:
12
Start:
4,109,496 bp from pter
End:
4,119,955 bp from pter
Size:
10,460 bases
Orientation:
Minus strand

Genomic View for RPL18P9 Gene

Genes around RPL18P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL18P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL18P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL18P9 Gene

Proteins for RPL18P9 Gene

Post-translational modifications for RPL18P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL18P9 Gene

Domains & Families for RPL18P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL18P9 Gene

Function for RPL18P9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL18P9 Gene

Localization for RPL18P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL18P9 Gene

Pathways & Interactions for RPL18P9 Gene

SuperPathways for RPL18P9 Gene

No Data Available

Interacting Proteins for RPL18P9 Gene

Gene Ontology (GO) - Biological Process for RPL18P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL18P9 Gene

Transcripts for RPL18P9 Gene

mRNA/cDNA for RPL18P9 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL18P9 Gene

No ASD Table

Relevant External Links for RPL18P9 Gene

GeneLoc Exon Structure for
RPL18P9
ECgene alternative splicing isoforms for
RPL18P9

Expression for RPL18P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL18P9 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL18P9 Gene:

RPL18P9
genes like me logo Genes that share expression patterns with RPL18P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL18P9 Gene

Orthologs for RPL18P9 Gene

Evolution for RPL18P9 Gene

ENSEMBL:
Gene Tree for RPL18P9 (if available)
TreeFam:
Gene Tree for RPL18P9 (if available)

No data available for Orthologs for RPL18P9 Gene

Paralogs for RPL18P9 Gene

No data available for Paralogs for RPL18P9 Gene

Variants for RPL18P9 Gene

Relevant External Links for RPL18P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL18P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL18P9 Gene

Disorders for RPL18P9 Gene

Relevant External Links for RPL18P9

Genetic Association Database (GAD)
RPL18P9

No disorders were found for RPL18P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL18P9 Gene

Publications for RPL18P9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association study of hematological and biochemical traits in a Japanese population. (PMID: 20139978) Kamatani Y. … Kamatani N. (Nat. Genet. 2010) 46 64

Products for RPL18P9 Gene

Sources for RPL18P9 Gene

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