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Aliases for RPL18P4 Gene

Aliases for RPL18P4 Gene

  • Ribosomal Protein L18 Pseudogene 4 2 3
  • RPL18_1_838 3
  • AC074085.2 5

External Ids for RPL18P4 Gene

Previous GeneCards Identifiers for RPL18P4 Gene

  • GC07M120870
  • GC07M121081

Summaries for RPL18P4 Gene

GeneCards Summary for RPL18P4 Gene

RPL18P4 (Ribosomal Protein L18 Pseudogene 4) is a Pseudogene.

Additional gene information for RPL18P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL18P4 Gene

Genomics for RPL18P4 Gene

Regulatory Elements for RPL18P4 Gene

Enhancers for RPL18P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H121437 1.2 Ensembl ENCODE 0.7 +3.0 2992 1 HDGF PKNOX1 ATF1 FOXA2 ARNT ARID4B SIN3A ZNF766 GLIS2 ATF7 ING3 FAM3C LOC100130618 RPL18P4 ENSG00000227371
GH07H121440 1 Ensembl ENCODE 0.7 -0.3 -258 1 BRD4 KLF1 ATF1 IRF2 ZBTB40 ZNF644 CTBP1 FOXK2 L3MBTL2 NR4A1 FAM3C LOC100130618 RPL18P4 LOC105375478
GH07H121436 0.6 ENCODE 0.7 +4.4 4380 0 TBP PKNOX1 L3MBTL2 MNT MGA YY1 RPL18P4 ENSG00000227371
GH07H121430 0.7 ENCODE 0.4 +9.7 9717 1 L3MBTL2 CEBPB MAFG CEBPG ATF2 ZNF316 IKZF1 NBN NFE2 ATF7 FAM3C RPL18P4 ENSG00000227371
GH07H121442 0.4 ENCODE 0.7 -1.7 -1722 0 GATA3 NFE2 FAM3C RPL18P4 LOC105375478
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL18P4 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL18P4 Gene

Chromosome:
7
Start:
121,440,812 bp from pter
End:
121,441,261 bp from pter
Size:
450 bases
Orientation:
Minus strand

Genomic View for RPL18P4 Gene

Genes around RPL18P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL18P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL18P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL18P4 Gene

Proteins for RPL18P4 Gene

Post-translational modifications for RPL18P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL18P4 Gene

Domains & Families for RPL18P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL18P4 Gene

Function for RPL18P4 Gene

genes like me logo Genes that share phenotypes with RPL18P4: view

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL18P4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL18P4 Gene

Localization for RPL18P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL18P4 Gene

Pathways & Interactions for RPL18P4 Gene

SuperPathways for RPL18P4 Gene

No Data Available

Interacting Proteins for RPL18P4 Gene

Gene Ontology (GO) - Biological Process for RPL18P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL18P4 Gene

Drugs & Compounds for RPL18P4 Gene

No Compound Related Data Available

Transcripts for RPL18P4 Gene

mRNA/cDNA for RPL18P4 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL18P4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL18P4 Gene

No ASD Table

Relevant External Links for RPL18P4 Gene

GeneLoc Exon Structure for
RPL18P4
ECgene alternative splicing isoforms for
RPL18P4

Expression for RPL18P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL18P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL18P4 Gene:

RPL18P4
genes like me logo Genes that share expression patterns with RPL18P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL18P4 Gene

Orthologs for RPL18P4 Gene

Evolution for RPL18P4 Gene

ENSEMBL:
Gene Tree for RPL18P4 (if available)
TreeFam:
Gene Tree for RPL18P4 (if available)

No data available for Orthologs for RPL18P4 Gene

Paralogs for RPL18P4 Gene

No data available for Paralogs for RPL18P4 Gene

Variants for RPL18P4 Gene

Relevant External Links for RPL18P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL18P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL18P4 Gene

Disorders for RPL18P4 Gene

Relevant External Links for RPL18P4

Genetic Association Database (GAD)
RPL18P4

No disorders were found for RPL18P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL18P4 Gene

Publications for RPL18P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. A quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications. (PMID: 21529783) Heath AC … Montgomery GW (Biological psychiatry 2011) 45 60
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 45 60
  4. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer SW … Tsui LC (Science (New York, N.Y.) 2003) 3 60

Products for RPL18P4 Gene

Sources for RPL18P4 Gene

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