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Aliases for RPL18AP4 Gene

Aliases for RPL18AP4 Gene

  • Ribosomal Protein L18a Pseudogene 4 2 3
  • RPL18A_2_30 3
  • AL355864.1 5

External Ids for RPL18AP4 Gene

Previous GeneCards Identifiers for RPL18AP4 Gene

  • GC01P033219
  • GC01P033446

Summaries for RPL18AP4 Gene

GeneCards Summary for RPL18AP4 Gene

RPL18AP4 (Ribosomal Protein L18a Pseudogene 4) is a Pseudogene.

Additional gene information for RPL18AP4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL18AP4 Gene

Genomics for RPL18AP4 Gene

GeneHancer (GH) Regulatory Elements for RPL18AP4 Gene

Promoters and enhancers for RPL18AP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I032980 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +1.8 1831 3.4 HDGF PKNOX1 ATF1 FOXA2 SMAD1 ARNT SIN3A IRF4 ZNF766 ZNF207 GC01P032982 PIR49571 RPL18AP4 RNF19B FNDC5 ENSG00000239670 LOC100419257
GH01I033085 Enhancer 0.7 dbSUPER 10.3 +106.4 106383 2.1 MEIS2 CTCF RB1 SIN3A CEBPG ZNF2 RAD21 CC2D1A CTBP1 MTA3 RPL18AP4 AZIN2 GC01P033098
GH01I033149 Enhancer 0.9 ENCODE dbSUPER 4.4 +171.0 170975 2.8 PKNOX1 KLF1 CLOCK SIN3A CEBPG ZFHX2 CTBP1 GATA3 POLR2A ELK1 TRIM62 A3GALT2 RPL18AP4 GC01M033142 ENSG00000279179 AZIN2
GH01I032977 Enhancer 0.5 ENCODE dbSUPER 0.8 -2.1 -2132 0.2 PRDM1 RNF19B ENSG00000278966 RPL18AP4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL18AP4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL18AP4 Gene

Genomic Locations for RPL18AP4 Gene
chr1:32,979,907-32,980,525
(GRCh38/hg38)
Size:
619 bases
Orientation:
Plus strand
chr1:33,445,511-33,446,125
(GRCh37/hg19)

Genomic View for RPL18AP4 Gene

Genes around RPL18AP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL18AP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL18AP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL18AP4 Gene

Proteins for RPL18AP4 Gene

Post-translational modifications for RPL18AP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL18AP4 Gene

Domains & Families for RPL18AP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL18AP4 Gene

Function for RPL18AP4 Gene

Phenotypes for RPL18AP4 Gene

genes like me logo Genes that share phenotypes with RPL18AP4: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL18AP4 Gene

Localization for RPL18AP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL18AP4 Gene

Pathways & Interactions for RPL18AP4 Gene

SuperPathways for RPL18AP4 Gene

No Data Available

Interacting Proteins for RPL18AP4 Gene

Gene Ontology (GO) - Biological Process for RPL18AP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL18AP4 Gene

Drugs & Compounds for RPL18AP4 Gene

No Compound Related Data Available

Transcripts for RPL18AP4 Gene

mRNA/cDNA for RPL18AP4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL18AP4 Gene

No ASD Table

Relevant External Links for RPL18AP4 Gene

GeneLoc Exon Structure for
RPL18AP4
ECgene alternative splicing isoforms for
RPL18AP4

Expression for RPL18AP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL18AP4 Gene

mRNA differential expression in normal tissues according to GTEx for RPL18AP4 Gene

This gene is overexpressed in Muscle - Skeletal (x7.8), Heart - Left Ventricle (x5.0), and Whole Blood (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of RPL18AP4 Gene:

RPL18AP4
genes like me logo Genes that share expression patterns with RPL18AP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL18AP4 Gene

Orthologs for RPL18AP4 Gene

Evolution for RPL18AP4 Gene

ENSEMBL:
Gene Tree for RPL18AP4 (if available)
TreeFam:
Gene Tree for RPL18AP4 (if available)

No data available for Orthologs for RPL18AP4 Gene

Paralogs for RPL18AP4 Gene

No data available for Paralogs for RPL18AP4 Gene

Variants for RPL18AP4 Gene

Additional Variant Information for RPL18AP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL18AP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL18AP4 Gene

Disorders for RPL18AP4 Gene

No disorders were found for RPL18AP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL18AP4 Gene

Publications for RPL18AP4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for RPL18AP4 Gene

Sources for RPL18AP4 Gene

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