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Aliases for RPL18AP3 Gene

Aliases for RPL18AP3 Gene

  • Ribosomal Protein L18a Pseudogene 3 2 3 5
  • RPL18A_6_1273 3
  • Bcm182 3

External Ids for RPL18AP3 Gene

Previous GeneCards Identifiers for RPL18AP3 Gene

  • GC12U900537
  • GC12P103189
  • GC12P104659
  • GC12P101719

Summaries for RPL18AP3 Gene

GeneCards Summary for RPL18AP3 Gene

RPL18AP3 (Ribosomal Protein L18a Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL18AP3 Gene

Genomics for RPL18AP3 Gene

Regulatory Elements for RPL18AP3 Gene

Enhancers for RPL18AP3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G104666 2 FANTOM5 Ensembl ENCODE dbSUPER 10.6 +405.4 405411 7.8 HDGF PKNOX1 WRNIP1 SIN3A FEZF1 YY1 ZNF207 FOS ZNF263 JUNB CHST11 WASHC4 RPL18AP3 TXNRD1 EID3 SLC41A2 PIR42556 GC12M104604
GH12G104275 1.9 FANTOM5 Ensembl ENCODE dbSUPER 10.9 +11.8 11832 2.6 HDGF PKNOX1 FOXA2 SIN3A FEZF1 YY1 FOS DEK ZNF263 JUNB EID3 WASHC4 RPL18AP3 ENSG00000257681 TXNRD1 ENSG00000257732 GC12P104268
GH12G103797 1.9 FANTOM5 Ensembl ENCODE dbSUPER 9.7 -462.9 -462853 10.0 FOXA2 CREB3L1 ARNT SIN3A ZNF2 ZNF766 FOS ZHX2 JUNB SMARCB1 NT5DC3 ENSG00000257681 RPL18AP3 ENSG00000257754
GH12G104602 1.9 FANTOM5 Ensembl ENCODE dbSUPER 9.7 +339.6 339607 4.2 PKNOX1 WRNIP1 ZNF766 CBX5 ZNF548 FOS DEK ZNF263 JUNB REST CHST11 WASHC4 RPL18AP3 TXNRD1 EID3 GC12M104604 MIR3922
GH12G104215 1.7 FANTOM5 Ensembl ENCODE 9.9 -46.5 -46533 7.1 PKNOX1 FOXA2 ARID4B SIN3A FEZF1 YY1 ZNF207 ZNF143 ZNF548 FOS WASHC4 EID3 RPL18AP3 TXNRD1 CHST11
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL18AP3 on UCSC Golden Path with GeneCards custom track

Promoters for RPL18AP3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000056517 32 199 BCOR ADNP ZMYM3

Genomic Location for RPL18AP3 Gene

Chromosome:
12
Start:
104,265,269 bp from pter
End:
104,265,892 bp from pter
Size:
624 bases
Orientation:
Plus strand

Genomic View for RPL18AP3 Gene

Genes around RPL18AP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL18AP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL18AP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL18AP3 Gene

Proteins for RPL18AP3 Gene

Post-translational modifications for RPL18AP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL18AP3 Gene

Domains & Families for RPL18AP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL18AP3 Gene

Function for RPL18AP3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL18AP3 Gene

Localization for RPL18AP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL18AP3 Gene

Pathways & Interactions for RPL18AP3 Gene

SuperPathways for RPL18AP3 Gene

No Data Available

Interacting Proteins for RPL18AP3 Gene

Gene Ontology (GO) - Biological Process for RPL18AP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL18AP3 Gene

Drugs & Compounds for RPL18AP3 Gene

No Compound Related Data Available

Transcripts for RPL18AP3 Gene

mRNA/cDNA for RPL18AP3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL18AP3 Gene

No ASD Table

Relevant External Links for RPL18AP3 Gene

GeneLoc Exon Structure for
RPL18AP3
ECgene alternative splicing isoforms for
RPL18AP3

Expression for RPL18AP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL18AP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL18AP3 Gene:

RPL18AP3
genes like me logo Genes that share expression patterns with RPL18AP3: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL18AP3 Gene

Orthologs for RPL18AP3 Gene

Evolution for RPL18AP3 Gene

ENSEMBL:
Gene Tree for RPL18AP3 (if available)
TreeFam:
Gene Tree for RPL18AP3 (if available)

No data available for Orthologs for RPL18AP3 Gene

Paralogs for RPL18AP3 Gene

No data available for Paralogs for RPL18AP3 Gene

Variants for RPL18AP3 Gene

Relevant External Links for RPL18AP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL18AP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL18AP3 Gene

Disorders for RPL18AP3 Gene

No disorders were found for RPL18AP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL18AP3 Gene

Publications for RPL18AP3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL18AP3 Gene

Sources for RPL18AP3 Gene

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