Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL18AP13 Gene

Aliases for RPL18AP13 Gene

  • Ribosomal Protein L18a Pseudogene 13 2 3
  • RPL18A_8_1622 3
  • CTC-398G3.1 5

External Ids for RPL18AP13 Gene

Previous GeneCards Identifiers for RPL18AP13 Gene

  • GC19P011633
  • GC19P011636

Summaries for RPL18AP13 Gene

GeneCards Summary for RPL18AP13 Gene

RPL18AP13 (Ribosomal Protein L18a Pseudogene 13) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL18AP13 Gene

Genomics for RPL18AP13 Gene

Regulatory Elements for RPL18AP13 Gene

Enhancers for RPL18AP13 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F011531 1.5 FANTOM5 Ensembl ENCODE 18.7 +10.5 10508 1.6 PKNOX1 ATF1 ZFP64 ZNF493 FOS ZNF202 ZNF263 REST ZNF518A ZNF623 ZNF627 ZNF136 ZNF844 ZNF442 ZNF625 ZNF44 ZNF799 ZNF441 ZNF491 ZNF700
GH19F011420 1.1 Ensembl ENCODE 18.5 -100.1 -100088 3.1 ATF1 PKNOX1 ZNF493 ZFP64 SIN3A DMAP1 ZNF48 ETS1 ZNF121 GLIS2 ZNF627 ZNF136 ZNF442 ZNF844 ZNF625 ZNF44 ZNF799 ZNF763 ZNF441 ZNF491
GH19F011317 0.5 Ensembl ENCODE 18.4 -200.2 -200249 9.0 CREB3L1 ZFP64 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC TBX21 MEF2D ZNF627 ZNF136 ZNF844 ZNF625 ENSG00000267174 ZNF44 ZNF441 ZNF491 ZNF700 ZNF763
GH19F011813 0.5 ENCODE 10.3 +293.1 293050 2.8 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF143 ZNF207 ZNF44 ZNF136 ZNF433 PRKCSH ZNF627 ZNF799 WDR83OS ZNF564 ZNF791 ZNF441
GH19F012155 0.5 ENCODE 10.2 +634.4 634395 2.2 HDGF PKNOX1 ZNF133 ARID4B SIN3A GLI4 ZNF48 ZNF2 GLIS2 ZNF143 FBXW9 ZNF627 PRKCSH RPL18AP13 ZNF700 ZNF709 ZNF44 ZNF441 ZNF20 ZNF625
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL18AP13 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL18AP13 Gene

Chromosome:
19
Start:
11,521,931 bp from pter
End:
11,522,550 bp from pter
Size:
620 bases
Orientation:
Plus strand

Genomic View for RPL18AP13 Gene

Genes around RPL18AP13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL18AP13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL18AP13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL18AP13 Gene

Proteins for RPL18AP13 Gene

Post-translational modifications for RPL18AP13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL18AP13 Gene

Domains & Families for RPL18AP13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL18AP13 Gene

Function for RPL18AP13 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL18AP13 Gene

Localization for RPL18AP13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL18AP13 Gene

Pathways & Interactions for RPL18AP13 Gene

SuperPathways for RPL18AP13 Gene

No Data Available

Interacting Proteins for RPL18AP13 Gene

Gene Ontology (GO) - Biological Process for RPL18AP13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL18AP13 Gene

Transcripts for RPL18AP13 Gene

mRNA/cDNA for RPL18AP13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL18AP13 Gene

No ASD Table

Relevant External Links for RPL18AP13 Gene

GeneLoc Exon Structure for
RPL18AP13
ECgene alternative splicing isoforms for
RPL18AP13

Expression for RPL18AP13 Gene

mRNA expression in normal human tissues for RPL18AP13 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL18AP13 Gene:

RPL18AP13
genes like me logo Genes that share expression patterns with RPL18AP13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL18AP13 Gene

Orthologs for RPL18AP13 Gene

Evolution for RPL18AP13 Gene

ENSEMBL:
Gene Tree for RPL18AP13 (if available)
TreeFam:
Gene Tree for RPL18AP13 (if available)

No data available for Orthologs for RPL18AP13 Gene

Paralogs for RPL18AP13 Gene

No data available for Paralogs for RPL18AP13 Gene

Variants for RPL18AP13 Gene

Relevant External Links for RPL18AP13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL18AP13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL18AP13 Gene

Disorders for RPL18AP13 Gene

No disorders were found for RPL18AP13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL18AP13 Gene

Publications for RPL18AP13 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL18AP13 Gene

Sources for RPL18AP13 Gene

Content
Loading form....