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Aliases for RPL18AP11 Gene

Aliases for RPL18AP11 Gene

  • Ribosomal Protein L18a Pseudogene 11 2 3
  • RPL18A_5_961 3
  • RP11-134K1.2 5

External Ids for RPL18AP11 Gene

Previous GeneCards Identifiers for RPL18AP11 Gene

  • GC09P008706

Summaries for RPL18AP11 Gene

GeneCards Summary for RPL18AP11 Gene

RPL18AP11 (Ribosomal Protein L18a Pseudogene 11) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL18AP11 Gene

Genomics for RPL18AP11 Gene

Regulatory Elements for RPL18AP11 Gene

Enhancers for RPL18AP11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G008717 1 ENCODE dbSUPER 0.4 +5.2 5223 1.0 INSM2 FEZF1 ZNF366 PATZ1 ZSCAN5C PRDM10 ZNF639 GFI1B OVOL3 ZEB2 RPL18AP11 RNU7-185P
GH09G008732 1.3 Ensembl ENCODE dbSUPER 0.3 +20.8 20805 2.9 FEZF1 ZNF366 ZNF263 OVOL3 ZEB2 ZNF398 REST ZNF843 NR2F2 PRDM6 RNU7-185P RPL18AP11
GH09G008721 0.9 dbSUPER 0.4 +10.6 10594 5.0 ZSCAN4 INSM2 KLF17 FEZF1 ZNF2 ZNF121 ZNF366 SCRT2 ZSCAN5C EGR2 RNU7-185P RPL18AP11
GH09G008719 0.8 ENCODE dbSUPER 0.4 +6.7 6662 1.0 SCRT1 GATA2 GLIS1 SCRT2 RPL18AP11 RNU7-185P
GH09G008711 0.4 dbSUPER 0.7 -1.2 -1195 1.4 EP300 RNU7-185P RPL18AP11 ENSG00000235389
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL18AP11 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL18AP11 Gene

Chromosome:
9
Start:
8,713,276 bp from pter
End:
8,713,894 bp from pter
Size:
619 bases
Orientation:
Plus strand

Genomic View for RPL18AP11 Gene

Genes around RPL18AP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL18AP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL18AP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL18AP11 Gene

Proteins for RPL18AP11 Gene

Post-translational modifications for RPL18AP11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL18AP11 Gene

Domains & Families for RPL18AP11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL18AP11 Gene

Function for RPL18AP11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL18AP11 Gene

Localization for RPL18AP11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL18AP11 Gene

Pathways & Interactions for RPL18AP11 Gene

SuperPathways for RPL18AP11 Gene

No Data Available

Interacting Proteins for RPL18AP11 Gene

Gene Ontology (GO) - Biological Process for RPL18AP11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL18AP11 Gene

Drugs & Compounds for RPL18AP11 Gene

No Compound Related Data Available

Transcripts for RPL18AP11 Gene

mRNA/cDNA for RPL18AP11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL18AP11 Gene

No ASD Table

Relevant External Links for RPL18AP11 Gene

GeneLoc Exon Structure for
RPL18AP11
ECgene alternative splicing isoforms for
RPL18AP11

Expression for RPL18AP11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL18AP11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL18AP11 Gene:

RPL18AP11
genes like me logo Genes that share expression patterns with RPL18AP11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL18AP11 Gene

Orthologs for RPL18AP11 Gene

Evolution for RPL18AP11 Gene

ENSEMBL:
Gene Tree for RPL18AP11 (if available)
TreeFam:
Gene Tree for RPL18AP11 (if available)

No data available for Orthologs for RPL18AP11 Gene

Paralogs for RPL18AP11 Gene

No data available for Paralogs for RPL18AP11 Gene

Variants for RPL18AP11 Gene

Relevant External Links for RPL18AP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL18AP11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL18AP11 Gene

Disorders for RPL18AP11 Gene

No disorders were found for RPL18AP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL18AP11 Gene

Publications for RPL18AP11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL18AP11 Gene

Sources for RPL18AP11 Gene

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