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Aliases for RPL18AP10 Gene

Aliases for RPL18AP10 Gene

  • Ribosomal Protein L18a Pseudogene 10 2 3
  • RPL18A_4_806 3
  • AC004692.5 5

External Ids for RPL18AP10 Gene

Previous GeneCards Identifiers for RPL18AP10 Gene

  • GC07U902605

Summaries for RPL18AP10 Gene

GeneCards Summary for RPL18AP10 Gene

RPL18AP10 (Ribosomal Protein L18a Pseudogene 10) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL18AP10 Gene

Genomics for RPL18AP10 Gene

Regulatory Elements for RPL18AP10 Gene

Enhancers for RPL18AP10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F044079 1.4 Ensembl ENCODE 16.2 +808.6 808573 6.2 HDGF PKNOX1 ARNT MLX CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 ENSG00000228680 DDX56 POLM RASA4CP ENSG00000239556 POLR2J4 ENSG00000228596 RPL18AP10 MIR3943 HECW1-IT1
GH07F044121 1.1 ENCODE 16.2 +848.9 848911 3.4 HDGF PKNOX1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 YY1 ZNF143 ENSG00000228680 SNORA5B RPL18AP10 ENSG00000228596 MIR3943 DDX56 SNORA5C NACAD POLR2J4 GCK
GH07F044184 1.1 Ensembl ENCODE 16.2 +910.9 910908 1.8 YBX3 KLF17 SIN3A GLI4 RFX5 GLIS2 ZNF366 SCRT2 RCOR1 FOS ENSG00000228680 ENSG00000228596 RPL18AP10 SNORA5B SNORA5C ENSG00000228434 SPDYE1 TBRG4 DDX56 YKT6
GH07F042830 0.8 ENCODE 16.2 -442.6 -442594 2.1 CTCF ZSCAN18 ZNF792 ZNF266 RAD21 SMC3 ZBTB20 NFE2L2 ZNF654 ZNF501 ENSG00000228680 LINC01448 MIR3943 RPL18AP10 HECW1-IT1 GC07M042842 TCP1P1
GH07F044146 0.7 ENCODE 16.2 +871.4 871438 0.2 HDGF SUZ12 MAX GLI4 ZNF366 EZH2 ZNF263 RNF2 NRF1 ZNF645 ENSG00000228680 ENSG00000228596 RPL18AP10 MIR3943 MYL7 LOC105375258
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL18AP10 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL18AP10 Gene

Chromosome:
7
Start:
43,274,129 bp from pter
End:
43,274,634 bp from pter
Size:
506 bases
Orientation:
Plus strand

Genomic View for RPL18AP10 Gene

Genes around RPL18AP10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL18AP10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL18AP10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL18AP10 Gene

Proteins for RPL18AP10 Gene

Post-translational modifications for RPL18AP10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL18AP10 Gene

Domains & Families for RPL18AP10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL18AP10 Gene

Function for RPL18AP10 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL18AP10 Gene

Localization for RPL18AP10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL18AP10 Gene

Pathways & Interactions for RPL18AP10 Gene

SuperPathways for RPL18AP10 Gene

No Data Available

Interacting Proteins for RPL18AP10 Gene

Gene Ontology (GO) - Biological Process for RPL18AP10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL18AP10 Gene

Transcripts for RPL18AP10 Gene

mRNA/cDNA for RPL18AP10 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL18AP10 Gene

No ASD Table

Relevant External Links for RPL18AP10 Gene

GeneLoc Exon Structure for
RPL18AP10
ECgene alternative splicing isoforms for
RPL18AP10

Expression for RPL18AP10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL18AP10 Gene

mRNA differential expression in normal tissues according to GTEx for RPL18AP10 Gene

This gene is overexpressed in Testis (x30.5).

NURSA nuclear receptor signaling pathways regulating expression of RPL18AP10 Gene:

RPL18AP10
genes like me logo Genes that share expression patterns with RPL18AP10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL18AP10 Gene

Orthologs for RPL18AP10 Gene

Evolution for RPL18AP10 Gene

ENSEMBL:
Gene Tree for RPL18AP10 (if available)
TreeFam:
Gene Tree for RPL18AP10 (if available)

No data available for Orthologs for RPL18AP10 Gene

Paralogs for RPL18AP10 Gene

No data available for Paralogs for RPL18AP10 Gene

Variants for RPL18AP10 Gene

Relevant External Links for RPL18AP10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL18AP10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL18AP10 Gene

Disorders for RPL18AP10 Gene

No disorders were found for RPL18AP10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL18AP10 Gene

Publications for RPL18AP10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL18AP10 Gene

Sources for RPL18AP10 Gene

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