Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL17P8 Gene

Aliases for RPL17P8 Gene

  • Ribosomal Protein L17 Pseudogene 8 2 3
  • RPL17_4_153 3
  • AC093422.1 5

External Ids for RPL17P8 Gene

Previous GeneCards Identifiers for RPL17P8 Gene

  • GC01P203438

Summaries for RPL17P8 Gene

GeneCards Summary for RPL17P8 Gene

RPL17P8 (Ribosomal Protein L17 Pseudogene 8) is a Pseudogene.

Additional gene information for RPL17P8 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P8 Gene

Genomics for RPL17P8 Gene

GeneHancer (GH) Regulatory Elements for RPL17P8 Gene

Promoters and enhancers for RPL17P8 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I205203 Enhancer 0.8 FANTOM5 Ensembl 550.8 +1.9 1944 0.6 ZNF121 ZBTB48 ZNF341 ID3 ZNF600 PRDM1 EGR2 RPL17P8 CNTN2 RBBP5 CDK18 DSTYK
GH01I205204 Enhancer 0.2 Ensembl 550.8 +1.1 1144 0.2 RPL17P8 DSTYK
GH01I205210 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 0.4 +9.3 9316 2.8 ZFP64 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 ZNF263 SP3 NFYC DSTYK MDM4 ELK4 PPP1R15B NFASC TMCC2 CNTN2 RPL13AP11 LOC100420878 LOC101929459
GH01I205174 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.3 -26.0 -25954 2.7 HDGF NEUROD1 SIN3A GTF3C2 ATF7 FOS TSHZ1 REST ZNF592 MEF2D DSTYK ELK4 CNTN2 MDM4 GC01P205170 RPL17P8
GH01I205190 Enhancer 1 Ensembl ENCODE 0.4 -10.0 -9995 2.6 SIN3A DMAP1 ZSCAN9 RAD21 YY1 RCOR1 THAP11 RXRA SP5 REST TMCC2 LOC101929459 CNTN2 RBBP5 DSTYK RPL17P8 GC01P205170
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL17P8 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL17P8 Gene

Genomic Locations for RPL17P8 Gene
chr1:205,202,157-205,202,771
(GRCh38/hg38)
Size:
615 bases
Orientation:
Plus strand
chr1:205,171,285-205,171,899
(GRCh37/hg19)

Genomic View for RPL17P8 Gene

Genes around RPL17P8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P8 Gene

Proteins for RPL17P8 Gene

Post-translational modifications for RPL17P8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P8 Gene

Domains & Families for RPL17P8 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P8 Gene

Function for RPL17P8 Gene

Phenotypes From GWAS Catalog for RPL17P8 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P8 Gene

Localization for RPL17P8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P8 Gene

Pathways & Interactions for RPL17P8 Gene

SuperPathways for RPL17P8 Gene

No Data Available

Interacting Proteins for RPL17P8 Gene

Gene Ontology (GO) - Biological Process for RPL17P8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P8 Gene

Drugs & Compounds for RPL17P8 Gene

No Compound Related Data Available

Transcripts for RPL17P8 Gene

mRNA/cDNA for RPL17P8 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P8 Gene

No ASD Table

Relevant External Links for RPL17P8 Gene

GeneLoc Exon Structure for
RPL17P8
ECgene alternative splicing isoforms for
RPL17P8

Expression for RPL17P8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL17P8 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P8 Gene:

RPL17P8
genes like me logo Genes that share expression patterns with RPL17P8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P8 Gene

Orthologs for RPL17P8 Gene

Evolution for RPL17P8 Gene

ENSEMBL:
Gene Tree for RPL17P8 (if available)
TreeFam:
Gene Tree for RPL17P8 (if available)

No data available for Orthologs for RPL17P8 Gene

Paralogs for RPL17P8 Gene

No data available for Paralogs for RPL17P8 Gene

Variants for RPL17P8 Gene

Additional Variant Information for RPL17P8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P8 Gene

Disorders for RPL17P8 Gene

No disorders were found for RPL17P8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL17P8 Gene

Publications for RPL17P8 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL17P8 Gene

Sources for RPL17P8 Gene

Content
Loading form....